Panicum virgatum (switchgrass): 120663623
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Entry
120663623 CDS
T07260
Name
(RefSeq) heat stress transcription factor A-2b-like
KO
K09419
heat shock transcription factor, other eukaryote
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120663623
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
120663623
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Paralog
GFIT
Motif
Pfam:
HSF_DNA-bind
At4g38062_C
Pde4dip
HALZ
DUF2999
Peptidase_M16
Autoind_bind
DUF6212
Motif
Other DBs
NCBI-GeneID:
120663623
NCBI-ProteinID:
XP_039798440
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All DBs
Position
2K:6189131..6192293
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AA seq
365 aa
AA seq
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MDPVLNPVKEESHGDGGLLPGAAAGDGPSAAAPKPMEGLHDAGPPPFLTKTYDMVDDAAT
DPIVSWSATNNSFVVWDPHAFATMLLPRHFKHNNFSSFVRQLNTYGFRKVDPDRWEFANE
GFLRGQRHLLKNIRRRKPPTQNASNQQSLGSYLEVGHFGYDAEIDRLKRDKQLLMAEVVK
LRQEQQNTNANLKAMEDRLQGTDQKQQQMMAFLARVMRNPEFLKHLVSQNEMRKELQDAI
SKKRRRRIDQGPEVDDLGTSSSLEQGSPVLFDPQDSVEFLVDGIPTDLESTAFNGEGLVE
PQDIDLGTSEQQQDMPQEDLTDNFWEQLLNEGLGEENDNPVVEDDMNVLSEKMGYLNSDG
STSRK
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggacccggtgctgaacccggtgaaggaggagagccatggggatggcggtttgttgccg
ggcgcagcggctggggatgggccgtctgccgccgcgccgaagccgatggaggggctgcac
gacgccgggccgccgccgttcctgaccaagacctatgacatggtcgatgacgcggccacc
gatcccatcgtgtcgtggagcgccaccaacaacagcttcgtggtgtgggatccccatgct
ttcgccaccatgctgctgcccaggcacttcaagcacaacaacttctccagcttcgtcagg
cagctcaacacctatggtttcaggaaggtggatcctgatcggtgggaatttgcgaatgag
gggtttttacggggacaaaggcacctcctgaagaacattaggcgtcgaaaacctcctact
cagaatgcctcaaaccagcagtctcttgggtcataccttgaggtgggacactttggatat
gatgctgagattgaccggctgaagagggacaagcaattattgatggcagaagtggtgaag
ctaaggcaggagcagcagaacacaaatgcaaatctcaaagccatggaggataggctacaa
ggcactgatcagaagcagcagcagatgatggcgttcttggcacgcgtcatgcggaaccct
gaattcttgaagcacctggtttcccagaacgagatgagaaaggagctccaagatgctatt
tcaaagaaaagaaggcgccgcattgatcagggacctgaagttgatgacttggggaccagt
agcagcctagagcaaggttcaccagttctatttgacccccaagactcggtcgaattcctt
gttgatgggattccaactgatcttgagagtacagctttcaatggcgaaggcctggttgag
ccacaggatattgatcttggtacctctgagcagcagcaagacatgccccaggaggacttg
actgacaacttctgggagcaattgctgaatgaaggacttggcgaggagaatgacaaccct
gttgtcgaggatgatatgaatgtgctgtctgagaagatgggctatctcaattcagatggc
tcgacatccaggaaatag
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