Panicum virgatum (switchgrass): 120663677
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Entry
120663677 CDS
T07260
Name
(RefSeq) uncharacterized protein LOC120663677 isoform X1
Organism
pvir
Panicum virgatum (switchgrass)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAP
SAP_new25
Motif
Other DBs
NCBI-GeneID:
120663677
NCBI-ProteinID:
XP_039798503
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All DBs
Position
3N:complement(2625125..2636245)
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AA seq
2317 aa
AA seq
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MDFAGMKRRELQALCKRHGLPAGGTNADLVARLDAALLGGARAEEQEGVVGVPERKGCLK
RSVGDAGEAKKVTFAVEESRGRRLRSRVVWSPVVARTRGKRSEAGSTDSAADPGISARAG
ENVPVRRSRRNSLTAAEVEEVEEAVAVGRKRKPKSQEIAEDVAVSAQPVAPCRVSRRSSL
SGTTVLLLPAVEKKRGRGKAADGKNKLVTEEQAAEAQGLSAAAPPTVVESKRGRRKGPDV
QNSSRVEVSARTTRSRSVEAVVMSPPVLENKRKRKSGDAQPDVELHPVAEVPRNDAPVTR
SLRNRVVQVNNSTVEETHTSQQPENKTQPTRPATCRNQQVASSMEEEDQEQVAAPSKAPP
SKRSRRNNSKPRNANSESNKLISAPVEAKDSKIAHPSTHHNAKAEDAEKQPIVNEPVRRS
TRKSVVSAMLDNEKGLIEEKNLETHARRSTRRSIVPVEDIKGAGEEIQNAKGEDAAKQPA
VKNPIRRSTRKSVVSGMLEKEKVLIAENNPEAHVRRSMRKSVVPVKDINGVGEDIQNAKS
GTVEKQLVVNQPVRRSSRKSIMPDTLENESGSLVEETNAEAHVRARKSLLPNMRNKEDPD
NSQMTRNENFQIGKCEDEKQQKVKEHVRRSRRSVAAVMLEEQNKGLHEGKMSTIPVRRST
RKSVALNVVEKGSNHTEKVGREQSGVGTRRLKARDKLTDHAVAVPVVPSEDELQVDVQKN
QDLTVKSPNHKLSDGNETHPSSDKFVSCESVGEEGLKLRVHRTSSVGTSSSANDFWDMED
FSGQKFRKQQSTQTPCEKDNTRANYDKPQRVQQASTSTTSKGRSSKRRQTRTTAPEEVMS
IEEANDGMVIREETMDTHKASQEYSKESSSRSQEICQVSATSEGFSSGPLLATVTLPDEI
YARQSVHKVIPASETGGLAKESSEKSKQPQGHSDIQADDSHLSEIGNGELDQSSSIAELL
PHNGFVTEDKTLIGEDVLPVDFTVGDDEGQSPVSGQGRVDWEANTSESGEKSLADDRSTG
LHNKSLQHDIDIVAKESESGEDVVPMSFTTEEHGIKYSVSPVAVERSVIGEASTCESAGK
TLTGILSNDLYTKHLQHDCDVITKEIGEASGSAVEISDNTPEIHCDAIAEGSIRAADLGS
CPSSGGKGNPLLKNLHDSILPVMNSAQRCSSYGRRSSFGLEFLLEDCKENCSRNVENIAV
EVDGGNKPSTCVTPDLYVGSDCGLEDEDVQPTGFDADKKLDVDLDAAEEDVVDEKNYDEH
VAAKPDLKIKLNGEHNGLDMESDCSIAEKNVRLVEDNPDNEEVTVQVQQANVQEGDPEKP
SQFSATPECKHECGLPNEAVLHSKKNKGCLSSEEQSPFGLQSLFSQQSIEKSVECGTLAS
ATIHAENGFDELKYGHVKCSLKKTRVSEPFSQLDTNEDSCTVSQNDDCMFISQQDKGIEG
LSKASLDEESVPSGFSSDAKHIKEVINSEEGTCKGEGSKEVVHSDDLKASSEETDVNGPD
TIEYSSFSFATPGYKHNDALSEEAVRTMKKYAGTCSSNPRELLMDLQSLFSKENIEESDP
HDGLAFSSAKSPGDESIDVKQQVEVHLGSNPSQLESTDLLDELIGCSKTEVLHQGHKGLC
REDREEQVASGPFTNDIVETAAAKYIESGAVLLPSEERSNLKDGQLNSKQENPIVMGSSL
NFDKDVDVTNTSFNESIVDIVDQRTPSGSALPEDCRTDHNPQREVLDGCSVESSLQGSTM
VTNKIDSGVAGTIGIGNPSFSLATPDHRHEGVLSEEKYTGTRSADPRHLLMDLQSLFSEG
SVEKSNSHDVAFSSSERGRNEPTICHVEKLVDTLVSSEPDMYQGLCQDLSRAEEKESCVS
ISMQLNPELKDDEVEKHNLSCEKDASQILGITRSVLSKTALLPKDSDTIYWQEQELPNDL
SPLKSGICQSHGQKHIVESNSRLSSCDTEVLHKDHKDERNIRNEDKTIPKVLENDMPEVA
PIKRLESAIMLPSVAGKSEMSDELLNTKLSDGGEEHSFSSDKYTIKDFCTGHAKNDLFPL
PKDCHIDSCQKQEIPDVLYLPKSPEESTNCQDESVSGSGPCQTSWQQCINESSSVQVTSN
IEVLNQNHEEGNQNSEGQITPIRSIVSEDADTERSEREIGLTPPAGPSALPDEQLNTKVE
CHEAERNCCYDEDTSSLFDTESLYSKASSLHEDTRKDTSPSDLSAPRSPEESTVFLNSSV
PGSVGICRSSRRRGIDELRAKLQSFKVSSTVKGSYIAMSAPRPKQGDNLSQSAIALLRNS
ENAPAVKVGHPGKPDPDLPVDKRCSPSVEDQGITDRQ
NT seq
6954 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgcggggatgaagcggcgggagctgcaggcgctctgcaagcgtcacggcctc
cccgccggaggcaccaacgccgacctcgtcgcccgcctcgacgccgcgctcttggggggc
gctcgtgcggaagagcaggaaggtgtggtcggagtaccagagaggaaggggtgtctgaag
cgctcggtcggagatgctggcgaggcgaaaaaggtgactttcgcggtggaggaatcgagg
gggaggaggctgaggtcccgggtcgtctggtcgcccgtggttgccaggactagggggaag
cgttctgaagctggtagtactgattctgctgctgatcctggaatttccgcaagggcaggt
gaaaatgttccagtgagacgctccaggagaaattctttgactgctgctgaggtcgaggaa
gtagaagaagctgttgctgttggcaggaaacggaagccaaagagccaggaaattgctgag
gacgttgctgtcagtgctcagcctgtagctccttgcagagtctcgaggaggtcgagcttg
tcaggaaccaccgttctgttgcttcctgctgttgagaagaagagagggagggggaaggca
gcagatggtaagaataaacttgttactgaggagcaggctgctgaggctcaaggtttgtct
gcagcggcgccacctacagttgtggagagtaagaggggcaggaggaagggacctgatgtg
cagaattcatctagggtggaagtatccgctaggaccacaagatcccgctcagtagaagct
gttgtgatgtcgccccctgtgcttgagaacaagaggaagaggaagtcaggagatgcacaa
ccagatgtagagctgcatccagttgcggaggtgcctagaaatgatgctcctgtcaccaga
tctttgaggaacagggttgtccaggttaacaacagtactgtggaggaaactcacactagc
cagcagccagaaaacaagacgcagcctactagaccagctacgtgcaggaatcaacaggtt
gcatcttctatggaggaagaagatcaagaacaagttgctgctcctagtaaggcccctcca
tcgaagcgatcaaggagaaacaattccaagcccagaaatgcaaattcagaaagcaacaaa
ttgattagtgctccagtggaggccaaagactcaaaaatagctcacccatcgacacaccat
aatgctaaggctgaagatgcggagaagcaaccaatagtcaatgaacctgttaggcgatca
acacgtaaatctgttgtctcagctatgcttgataatgagaagggtctaattgaagaaaag
aaccttgaaacacatgctaggagatcaacgcggagatctattgtgccggttgaagatatc
aaaggtgctggtgaagagattcagaatgctaagggtgaagatgccgcaaagcagccagca
gttaaaaaccctattaggcgatcaacacgtaaatcagttgtctcaggcatgcttgagaaa
gagaaggttctcattgcagaaaataacccagaagcacacgttaggagatcaatgcggaaa
tccgttgttccagttaaagatattaacggtgttggtgaagacattcaaaatgctaagagt
ggcactgtggagaagcaattagttgtgaatcaacctgtcaggcgttcatcacgtaaatct
attatgccagatacacttgagaacgagagtggatctctagttgaagaaacgaatgctgag
gcacatgttagggcacggaagtctcttcttcctaatatgcgtaacaaggaggaccctgat
aacagtcaaatgaccagaaacgagaactttcaaattggtaaatgtgaagatgagaaacaa
caaaaagtaaaggaacatgttaggcgatcaaggagatctgttgccgcagtgatgcttgag
gaacaaaataagggtcttcatgaggggaaaatgtcaacaattcctgtgaggagatcaaca
cgtaaatctgttgctctcaatgtagttgaaaaggggagcaatcacactgaaaaggttgga
agggaacagtcaggagttggaacaaggaggctgaaagcaagagataaacttacagaccat
gctgtggctgtgcctgtggttccttctgaagacgaattgcaggttgatgtgcagaaaaat
caagacctgacagtcaaatctccaaatcataagttatctgatggtaatgagacacatcct
agttcagacaagtttgtgtcgtgtgagagcgttggtgaagagggcttgaaattgagagtg
cacagaacgtcttcagtgggaacatcatcttcagccaatgatttctgggatatggaagat
tttagtggacagaaattcaggaagcaacagagcacacaaaccccatgtgaaaaagataac
acaagagctaactatgataagccacagagagtacagcaggcatcaacttccacaacttca
aagggaaggtcttcaaagaggagacagacaaggacaactgctccagaagaagttatgtcc
attgaggaggcaaatgatggcatggttatcagggaagaaacaatggacacacataaagcg
tctcaagaatatagtaaggagtctagtagcagaagtcaagaaatttgtcaggttagtgcc
acaagcgaagggttctcttcaggtccattgcttgcaacagtaacactccctgatgagatt
tacgcaagacagagtgtgcataaggtgatacctgcgtcagaaactggtggccttgcaaag
gaaagttcagagaagagtaaacaacctcaaggacactctgacattcaagctgatgatagc
catttatctgaaataggaaatggggaattggatcaatcatcaagcatcgcagaactactc
ccacacaatggttttgtcacagaggacaaaacattgattggtgaagatgttttgcctgtt
gacttcactgttggagatgatgaagggcaaagccctgtatctgggcaagggagagttgac
tgggaagcaaatacaagtgagtctggagaaaagagcctagctgatgacaggtccactggt
ctccacaacaaaagtctgcaacatgatattgacatagtagctaaagagtctgagtctggt
gaagatgttgtgccaatgagtttcaccactgaagagcatggaataaaatattcagtaagc
cctgttgcagtggaaaggagtgttattggggaagcaagtacatgtgaatctgcagggaaa
acattaactggcatcttgtctaatgatctctacaccaaacatctgcaacatgattgtgat
gtaataactaaagagattggtgaagcttcgggatctgccgtagaaatatcagacaatact
ccagaaattcactgtgacgcgattgctgaaggaagtattcgagctgctgatctggggagc
tgtcccagcagtggtggaaaagggaaccctcttttgaaaaatctgcatgacagtattctt
ccagtaatgaattctgctcagagatgttcatcatatggaagacgttcgtcatttggtctt
gagtttctgttagaagactgcaaagaaaactgttccagaaatgtggaaaatattgctgta
gaagttgatggtggaaacaaacctagcacctgtgtaactcctgatttgtatgtgggatca
gattgtggtctggaagatgaggatgtgcaacctactggatttgatgctgataagaaactt
gatgtggatctggatgccgcagaagaagacgttgttgacgaaaaaaattatgatgaacat
gttgctgccaaacctgacctaaaaataaagttaaatggtgaacataatggtcttgatatg
gaatcagattgtagcattgctgaaaagaacgtgaggcttgttgaagataatcctgataac
gaagaagttacagttcaggtccagcaggctaatgtacaagaaggtgatcctgagaagcct
tcacaattttcagcaacaccagagtgtaaacatgaatgtggtttgcccaacgaagcagta
ttgcattcaaagaagaacaagggatgtttatccagtgaagaacaatcaccgtttggccta
caatccctgttctcacagcaaagtatagaaaaatctgtggagtgtggtacccttgcatct
gcaacaattcatgcagaaaatggatttgatgaattaaaatatggccatgtgaagtgttca
ctaaaaaagactcgtgtgtcagaacctttttcacaacttgatactaatgaagacagttgt
acggtttcccaaaatgatgattgtatgttcatatcccagcaagataagggaatagaagga
ttatcaaaggcaagtcttgatgaagaatcggttccatcaggcttttcgtcggacgcaaag
cacataaaagaggtcattaattctgaggaagggacctgtaagggtgaaggaagtaaggaa
gttgttcattctgatgaccttaaagcttcatctgaagaaacagatgtcaatgggccagat
actatcgaatattcttcatttagttttgcaactcctggttataagcacaatgatgctttg
tctgaggaagcagtgcgcacaatgaagaaatatgctggaacatgctcatcaaatcccaga
gaattacttatggacctacagtccctgttctcaaaggaaaacattgaagaatctgatccg
catgatggacttgcattctcaagtgctaaaagtccaggagatgaatcaattgatgtgaaa
caacaggttgaggtacatcttggttctaatccatctcagttagaatcaactgatctcttg
gatgaactgattgggtgttctaagactgaagtgctgcatcagggtcataaaggtctatgc
agagaggatagagaagagcaagttgcttctggacccttcacaaatgatattgtggagact
gctgctgccaaatacatagaaagtggagctgtgctgctcccgtccgaagaaaggtcaaat
ttgaaagatgggcagcttaactccaagcaggaaaacccaatagttatgggatctagcctg
aactttgataaagatgtagatgttactaatacttcgttcaatgagtctattgtggatatt
gttgatcaaagaactccatctggttcggctttaccagaagattgtcgtacagatcataac
ccgcaacgagaggttttagatggctgctcagtggaatcatctcttcaagggtcgacaatg
gttactaataaaattgattctggtgtagcaggtactattggtattgggaacccttcattt
agtttagcaactcctgatcatagacatgaaggtgttttgtctgaggaaaaatatactgga
acacgctcggcagatcccagacatttactcatggatctgcagtctcttttctcagaggga
agcgttgaaaaatccaattcgcatgatgttgcattttcaagttctgaaaggggaagaaat
gaacctaccatttgccatgttgagaaactggttgacacacttgtttcttcagaacctgat
atgtaccaaggcctttgtcaagatctcagtagagctgaagaaaaagagagctgcgtatct
atttccatgcaactaaatcctgagctgaaggacgatgaagtggagaaacacaacttaagc
tgtgagaaagacgccagtcagattcttggcataactagatctgtgctgagcaaaacagcc
cttttacccaaggacagtgataccatttattggcaggaacaggagctaccaaatgactta
tccccacttaaatctggaatttgtcaatctcacggccagaaacacatagttgaaagcaac
tccaggctatcgagttgcgatactgaagtgctccataaagatcataaagatgaaagaaac
atacgtaatgaagacaaaaccattccaaaagtccttgaaaatgacatgcctgaagttgcc
ccaatcaaacgactggaaagtgcaataatgctgccctcagttgctggaaagtcagaaatg
tccgacgagctgcttaacaccaagttgagtgatggaggcgaggaacacagctttagttct
gataaatatacaattaaagatttctgtactgggcatgcgaagaacgatctgttccctctg
cccaaggactgccatatagactcttgccagaaacaggagatcccagatgtcctttatcta
cctaaatctcctgaagaatctacaaattgtcaggatgagagtgtttcaggatcaggacct
tgtcagactagttggcaacagtgtataaatgaaagcagcagtgtgcaggtgacttctaat
attgaagtgctcaatcaaaatcatgaggaaggcaaccaaaatagtgaaggccaaattact
cctattcgaagcattgtgtctgaagatgcagatactgaaagatcagaaagggaaataggt
ctgacccctcctgcaggaccgtcagcattgccggatgagcagcttaacacgaaggtggag
tgccacgaagctgaacgcaactgttgctatgatgaggacacttcgagcttatttgatact
gaatcgctgtacagcaaagcatccagtttgcacgaagacactcgtaaggatacttctcca
agtgatctatctgctccgagatctcccgaggaatctacagtttttctgaactcttctgtt
ccgggatcagtaggaatctgtcgaagcagcaggagaagaggtatagacgaactccgcgcc
aagctgcagagtttcaaagtctccagcactgtaaaaggaagctacattgctatgagtgcc
cctcgcccgaagcaaggtgacaatctgagccaatctgcaatcgcgttgctccggaacagc
gagaacgcacctgctgttaaagtaggccatcctggcaagccggaccctgatcttccggtc
gacaagcgctgcagcccatcagtggaagatcaagggatcactgataggcagtag
DBGET
integrated database retrieval system
