KEGG   Panicum virgatum (switchgrass): 120663678
Entry
120663678         CDS       T07260                                 
Name
(RefSeq) nucleolar protein 6-like
  KO
K14544  U3 small nucleolar RNA-associated protein 22
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    120663678
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvir03009]
    120663678
Ribosome biogenesis [BR:pvir03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    120663678
SSDB
Motif
Pfam: Nrap_D5 Nrap_D4 Nrap_D3 Nrap Nrap_D2 Nrap_D6
Other DBs
NCBI-GeneID: 120663678
NCBI-ProteinID: XP_039798506
LinkDB
Position
3N:2594067..2608279
AA seq 1050 aa
MAAAAEYSIDHKLSKLVEEARPSAAALRAAAQAADAVAELIKRVPQQQAPPEAARGFVRD
LGLEEEKLAFTFRPPEVVRLAGSHAVGAVTRPDVAADLLVRLPKECFHEKDFLNHRYHAK
RCLYLCVIEKNLRSSRLIRKVSWSTFQDEARKPVLDVYPATEIADLPGFYVRIIPTGNSL
FNVSKLNVSTRNNVRAHTKDGINLPTPKYNCSILEDMFLEENAEFMSSTFADWKALQEAL
VLVKVWARQRTSIYTHDCLNGYLISAILVFLTVDCGGSIITKSMTTRQIFRVVMNFLATS
KVWAKGLVIQSMKKRTITKEDLANCLKTFDVAIWDISGHVNLAFRMTKSAFVELQDEAAC
ALSCLDKCRDGGLEELFMTKVDFGAKFDSCLRINLKENSKFTSLSYCVDDESWRILENDV
QSLLQQGLTDRTKMIRVLRRSTPSKWKIMDGFSEFRNSPLLVGIMLSSLEKSFRLVDIGP
NPENRNEAIEFRRFWGEKAELRRFKDGNIAESTVWECESWERHTIIKRIADYVLMKHLSL
QKDDLIHVVDQLDFCLLVDGQDPVSSSGALLEAFDTLSKQLRLLDDVPLKISTVQPLDPA
FRHTSVFPPEPHPLAYGKSSQRLPNFTTTCIRSMEVMIQLEGSGNWPLDTVAMEKTKTAF
LLKIGESLEDRGMFVSASEDEVNVLTSGYSFLLKIFHERGLVLQNQAGDDNIQTALSQDK
MLFQRSQHSSMINGLHGRYQMYGPVVRLAKRWISAHLFSSFISEEAVELVVAYLFLKPFP
FHAPSSRVAGFLRFLRLLSSFDWTFSPMVVDINNDFNLKDEKEINENFMMSRKSYEQNPH
DIEPAMFLATSYDKASEAWTKQSPSKSVLKRMAAYAKSSAELLTNLILNGQSGQYTWECL
FRTPMSNYDAVILLHHEKLCCPSHVLFPAETPNGKLVIWGKPSKDFHPYMPLNKGAVKSL
HDARDKLLVNFDPITYFLRDLKGALPKAFKLWYGSIGGDAVGLTWDKPKKRGREEADETM
PEPTSILKEAGDVGKGLVRSVYLLKASKLQ
NT seq 3153 nt   +upstreamnt  +downstreamnt
atggccgccgccgccgaatactccatcgatcacaagctctccaagctcgtggaggaagct
cggccgagcgctgcggccctccgcgccgccgcccaggctgctgacgccgtcgcggagctc
atcaagagggtgccgcagcagcaggcgccgccggaggccgctcgaggtttcgttagggac
ctggggctggaagaagagaagctcgcgttcaccttccggccgccggaggtggtgcggctc
gctgggagccacgcggtcggcgccgtcacgaggcccgacgtcgctgccgaccttctcgta
cgcttacccaaggaatgcttccacgagaaggatttcctaaatcaccggtaccatgcaaag
aggtgcctttacctctgtgtcatcgagaagaacttgaggtcctctcggttaatccgcaaa
gtttcatggtctacctttcaggatgaggctcgaaagcctgtgcttgatgtatatccagca
acagaaattgcggaccttcctgggttctatgtgagaataatcccaaccgggaattctttg
ttcaatgtttcaaagttgaatgtatcaaccagaaacaatgtccgtgcacataccaaagat
ggcataaacctacccacaccaaagtacaattgtagcatattggaggacatgtttttggag
gaaaatgcagagtttatgagcagcacctttgctgactggaaagctttgcaagaggccttg
gtgttagtgaaagtttgggcacgtcaaagaacttcaatctacacacatgattgcctcaat
ggatacttaatatctgccatccttgtgtttcttactgtggattgtggaggaagcataatt
actaaatcaatgaccacaagacaaattttccgtgtcgtaatgaattttttggcaacttcc
aaggtgtgggcaaagggtttggtgattcaatcaatgaagaagcgtacaatcaccaaagag
gaccttgccaattgcctgaaaacatttgatgttgccatatgggatatatctggccatgta
aatctggcatttcggatgacaaagtctgcttttgtagagcttcaagatgaggcagcttgc
gcacttagttgccttgataaatgcagagatggtggacttgaagagctttttatgaccaaa
gttgattttggtgctaagtttgactcatgcttgaggataaacttgaaagagaactctaaa
tttacttcattaagctattgtgtggatgatgaatcttggagaatccttgaaaacgatgtt
cagtctttgctgcaacaaggacttacagatagaacaaagatgatccgagtcctgaggaga
agcacaccttctaaatggaaaataatggatggtttctcagaatttaggaacagtccactg
cttgttggcataatgcttagctcattggaaaagagttttcgtcttgttgatattggccca
aaccctgagaaccgcaatgaggctattgaatttaggagattttggggagagaaagctgaa
cttaggagattcaaggatggaaatattgctgaaagcacagtgtgggaatgtgaatcttgg
gagaggcacacaattatcaaaaggatagctgattatgtgcttatgaaacatttgtcgctg
cagaaggatgatttgattcatgttgttgatcagctggacttttgcctcttagttgatggc
caagatccggtctcatcttctggagctttgcttgaagcttttgatactttatctaagcag
ttacgtctgttggatgatgtcccgcttaaaatatctactgtgcaacccctagacccagct
tttaggcacacttctgtgtttcctcctgaacctcatccgctggcatatggaaagagttct
cagaggctgccaaatttcacaacaacttgcattagatctatggaagttatgattcagcta
gagggatctggtaactggccgttggatactgtggccatggagaagacaaagactgcgttt
cttttgaaaattggtgaaagcttggaggatcgaggaatgtttgtttccgccagtgaagat
gaggtgaatgtccttacatctggatattcattcttactcaaaatatttcatgaaagaggc
ttagtattgcaaaaccaagctggagatgataacattcaaactgctctatcacaagataag
atgctttttcaacggagccaacactcgagtatgatcaatgggctgcatggccgttaccag
atgtatggaccagtagtcaggctagcaaaaagatggatatctgcacacctattttcttca
tttatctcagaggaggcagttgaattggtggttgcttatctatttttgaagccattccca
ttccatgccccttcttctcgggttgctgggtttctcaggtttttgcggttgttatccagt
tttgactggaccttttcacccatggttgttgacataaataatgacttcaatctcaaggat
gagaaggagatcaatgaaaactttatgatgagcagaaaatcttatgagcaaaatcctcat
gatatagagcctgcaatgtttctcgctacgtcatatgataaagcatctgaagcatggaca
aaacagtcgccaagcaagtcggttctcaaacgaatggctgcttatgctaaaagcagcgca
gaacttttaacaaatcttatactaaatggtcaatcagggcaatatacgtgggagtgcctg
ttccgaacacctatgagcaattatgatgctgttattctcctccatcacgagaagctttgc
tgtccaagtcatgtacttttccctgccgagactcctaatggtaagttggtgatctggggc
aaacccagtaaagatttccacccatatatgccactcaataaaggggctgtgaaaagtttg
catgatgcaagagataaacttttggtaaacttcgacccaattacatacttcctgcgagac
ttaaagggcgcattacccaaggccttcaaactgtggtatggttcaataggaggagacgct
gttggtcttacatgggataagccgaagaagcgtggcagagaggaggctgatgaaaccatg
ccagagccaacatctatccttaaggaggctggggacgttggcaaaggtttggtgaggagt
gtatatctcctgaaagcatcaaagcttcagtaa

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