Panicum virgatum (switchgrass): 120663696
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Entry
120663696 CDS
T07260
Name
(RefSeq) suppressor of ferric uptake 1-like isoform X1
KO
K09184
GATA-binding protein, other eukaryote
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120663696
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120663696
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Gene cluster
GFIT
Motif
Pfam:
GATA
DUF7573
Motif
Other DBs
NCBI-GeneID:
120663696
NCBI-ProteinID:
XP_039798523
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Position
3N:2696984..2698924
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AA seq
476 aa
AA seq
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MATVEGYKTEPPGLGPRTGRSAATMATDDLAGGGREGEREGALGYILSLPAAALPLPVAV
SCLDATVPRKARSRPRLHAQPCSWWTFELPVPAPEEAKTPAPTAPAATNPTEEARPPRPQ
RSRPPVCQAPPHDPHTPAPAMERPAKRARRCLQCGAIETPQWRSGPMGSGTLCNACGVRL
KAAGALREQVHRPPPATARTVAEPPPESPVADSSPDGPIWEPGSVPDVYLLRKKPPKRGR
SPPPRTEPASPPAPAVFLVKKKKKKAPKTPNKKPWRPRKSAKRCLHCGSSSTPQWREGPM
GRSTLCNACGVRYRQGRLLPEYRPLVSPTFEPSEHANRHSQVLQLHRQRKGHQKNQQPLP
TEEPRPVDHPTGAPPCSGGGDDPMNVLLPRRWHNKNEYPPTPLHQPLPQPADSLAGDQHV
GDVDEPAPGRGGSNNDPNDAPSSLDPLLLEGRSLDPLLLEGPSAPLIVDGDDPFVD
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtggaagggtacaagacagagccgcctggattaggcccaagaaccgggcga
tctgcggcgaccatggcgaccgacgacttggccggcggcggcagggaaggggagcgggag
ggggccctcggatacatcctctcgctcccggcggcggcgctgcctttgcccgtcgccgtc
tcctgccttgacgccaccgtcccgcgcaaggcgcgcagccgcccccgcctccacgcccag
ccgtgctcctggtggaccttcgagctccccgtccccgcgccggaggaggcgaagacccca
gcccccacagcgccggcggccacgaatccgaccgaggaggcgaggcctccccgtccccag
cgctcgcgcccgcccgtgtgccaggccccgccccacgacccccatacccccgcgccagcc
atggagaggccggccaagagggcgaggaggtgcctgcagtgcggagccatcgagacgccg
cagtggaggtcgggcccgatggggtcgggcacgctctgcaacgcctgcggggtccggctc
aaggcggccggggcgctgcgggagcaggtgcaccggcccccgccggcgaccgcgaggacg
gtcgccgagccgccgccggagagcccggtggcagactcgtcgccggacggcccgatctgg
gagcccgggtcagttcccgacgtgtacctgctgaggaagaagccgccgaagcggggcagg
tctccgcctccgaggacggagcccgcgtcgccgccggcgccggcggtgttcctggtcaag
aagaagaagaagaaggcgccgaagacgccgaacaagaagccgtggcggcctcggaagtcg
gcgaagcggtgcctgcactgcgggtcgtcgtcgacgccgcagtggcgggagggcccgatg
ggccgcagcacgctgtgcaacgcgtgcggcgtgcggtacaggcaggggcggctgctgccg
gagtaccggccgctggtgagccccaccttcgagccgtcggagcacgccaacaggcacagc
caggtgctccagcttcaccgacagcggaagggccaccagaagaaccagcaacccctgcca
acggaggagccgcgacccgtggaccacccgaccggcgcgccaccgtgcagcggcggcggc
gatgacccgatgaacgtgctcctgccccggcgatggcacaacaagaacgagtacccgcca
acaccgctgcaccagcctctgccgcagccggcggacagcctcgccggcgaccaacacgtt
ggggacgtcgacgagccggccccaggacgtggcggcagcaataatgacccaaacgacgcg
ccgagctcgctggacccgttgctgctcgaagggcgctcgctggacccgttgctgctcgaa
gggccgtcggcgccgctgatcgtcgacggagacgatcccttcgtcgactag
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