Panicum virgatum (switchgrass): 120663704
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Entry
120663704 CDS
T07260
Name
(RefSeq) probable sodium/metabolite cotransporter BASS1, chloroplastic
KO
K03453
bile acid:Na+ symporter, BASS family
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
120663704
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Motif
Pfam:
SBF
SBF_like
MrkH_YcgR_like
Motif
Other DBs
NCBI-GeneID:
120663704
NCBI-ProteinID:
XP_039798532
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Position
3N:complement(2767710..2770849)
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AA seq
402 aa
AA seq
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MAPPLLLLPLPLRPIPSARPVSRPVTRLRLHLPFTNRHRRLSAALRVQCRAEQGPAAPPP
APRWHAALAAAAGLYPAYVTAGASVAIARPEAFRWFVDMAPGSYTATLGFIMLATGLTLQ
LKDFAALLRDRPLAILFGCAAQYTIMPAVGSIISRALGLPPSLSAGLILLGCCPGGTASN
VVTLVAQGDVPLSIVMTVCSTLAAVFLTPLLTKILAGAYIPVDAVKLSLSTLQVVVAPIL
LGSSIQTAFPSVVQFVTPFAPLMAVLASSLLASSVFSENFVRLRSTIADASSVNGDFFSG
DIRVVMLSVILLHFAGFFVGYAAAAIGGFKEKQRRAISIEVGMQNSSLGVVLAAAHFSSF
LVALPPALSAVIMNIMGSTLGLVWQYITPSGSKNETTDMHNA
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggctcctcctctcctcctcctccccctcccactccgccccatcccgtccgcgaggccc
gtgtcccggccggtgacacggctgcgccttcatctccccttcaccaaccgccatcgccgc
ctctccgccgccctccgagtccaatgccgcgcggagcaggggcccgccgcgcccccgccc
gcgccgcggtggcacgcggcgctggccgcggcggccggcctgtacccggcctacgtcacg
gctggcgcgtcggtcgccatcgcgcggcccgaggcgttccggtggtttgtcgacatggcg
ccggggtcgtacaccgccacgctcggcttcattatgctcgccacgggcctcaccctccag
ctcaaggacttcgccgccctcctccgcgataggcccctcgccattttgtttgggtgcgct
gcgcagtacactataatgcctgcggttgggtcgatcattagccgcgcgctggggctcccc
ccatccctctctgctggcctcatcctgctgggatgctgtcctggaggaactgcgtccaat
gtggtgactttagttgctcaaggggatgttccattatccatcgtgatgactgtctgcagc
actcttgctgcagtgttccttacacctctgctaacgaaaattctagctggtgcttacatt
cctgtggatgctgtcaagctttctctcagtactttgcaggttgttgttgccccaattcta
ttaggttcttctatacaaacagcatttccatcagtagttcaatttgttactccttttgca
cctctgatggcagtcttggcttcatcgcttctggcttccagtgtcttctctgagaatttt
gtacggctaagatccacaattgctgatgcatcttctgtgaacggagacttcttctctggg
gatatcagagttgtcatgctctctgtcatcttgctgcattttgctggcttctttgttggg
tatgcagcagctgctattggtggcttcaaagaaaaacaaaggagagcaatatcaattgag
gtaggaatgcaaaattcatccttgggggtagtgctagcagctgcacatttctcctcattc
ttggtcgccctgccacctgcactctcagctgtcatcatgaacatcatgggcagcacacta
ggtctcgtatggcaatatatcacaccttctggttcaaagaatgaaaccactgacatgcac
aatgcatga
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