Panicum virgatum (switchgrass): 120663767
Help
Entry
120663767 CDS
T07260
Name
(RefSeq) ubiquitin fusion degradation protein 1 homolog isoform X1
KO
K14016
ubiquitin fusion degradation protein 1
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120663767
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120663767
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120663767
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UFD1_N1
UFD1_N2
Motif
Other DBs
NCBI-GeneID:
120663767
NCBI-ProteinID:
XP_039798599
LinkDB
All DBs
Position
3N:complement(3315383..3319189)
Genome browser
AA seq
310 aa
AA seq
DB search
MYFEGYGYHGNTFEQTYRCYPASFIDKPQLEAGDKIIMPPSALDRLASLHIEYPMLFEVH
NAAAERTSHCGVLEFIAEEGMIYMPYWMMQNLLLQEGDMVFIKNANLPKGTYVKLQPHTT
DFLDISNPKAILEKTLRNFSCLTTGDSIMVAYNNKKYYIDIVETKPSNAISIIETDCEVD
FAPPLDYKEPEPVKPAVPANTEPTTEPPAEEEPKFTPFTGSGRRLDGKPSKGKDALASSP
AKRQANATNGVQPSTASSSQGGSSRKTTGKLVFGSGGSRADKAPEKEAKEEPKNDPKFAA
FTGKKYSLKG
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgtactttgaaggctatggctaccatggaaacactttcgagcagacatatcgctgctac
ccagcatctttcattgacaagccacaacttgaggctggtgacaaaattattatgccacca
tcagctcttgatcgtctcgcatctctgcatattgagtatcctatgctttttgaagtccac
aatgcggcagcagaacggacttcacattgtggtgttctggagttcattgcagaagaaggc
atgatctacatgccatattggatgatgcaaaatcttcttctgcaagagggagatatggtg
ttcataaaaaatgcgaacctccccaagggcacatatgtcaagttgcagcctcatacaaca
gactttttggatatctcaaaccccaaagcaatcttggagaaaactttgaggaacttttct
tgcctaaccacaggtgacagcattatggtagcatataataacaagaagtactacattgat
atagtggagacaaaaccttccaatgctataagtattattgagactgattgtgaggttgac
tttgctccaccacttgactataaggagcctgagccagtaaaacccgctgttcctgcaaac
acagagcctactacagaacctccagctgaagaagaaccaaaattcacccccttcaccggt
tcaggaaggcgtctggatgggaagccttctaagggtaaagatgcgctggcctcatcccca
gcaaagcgacaagctaatgcaaccaatggtgtgcagccctcaacagccagctcgtcacag
ggtggttcgtcgcgtaagaccacaggaaagcttgtctttggttcgggtggaagtcgagct
gataaggcgcctgagaaggaagcgaaggaggaaccgaagaatgatccgaaatttgcagcg
tttacgggaaagaagtactcactgaagggctga
DBGET
integrated database retrieval system
