Panicum virgatum (switchgrass): 120663800
Help
Entry
120663800 CDS
T07260
Name
(RefSeq) MAG2-interacting protein 2-like isoform X1
KO
K20473
neuroblastoma-amplified sequence
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120663800
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
NRZ (DSL1) complex
120663800
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIP2_C
All-alpha_MIP2
Beta-prop_MIP2
Sec39
ARM_KNTC1_1st
UBD
DUF4295
Motif
Other DBs
NCBI-GeneID:
120663800
NCBI-ProteinID:
XP_039798648
LinkDB
All DBs
Position
3N:4703264..4714661
Genome browser
AA seq
2462 aa
AA seq
DB search
MAAGAEDALYEIRRHASGSHVIPHFLQTQQEGYQGAATSSGSSDAGGGVLSYLSLQGVSK
LRERWTRYSALGRSTQRKRADGVALFVSPNAEYVSVTVGNRIIILRKHDDYASPCGVYTN
NDRITFFTNGAWLEAQGIFGVVDDLSTLYLIKENGDLLARRTCDQLKLSSYIIDLVVQDG
SSLLRPGFYIFTSDCMVHRFDYTQEPEASLCEVPISTKDVMSARTMQLPRSLSCIDYDQH
HSLFVLAADSNISISSNSYSGTYFLYLLHVDGNLELSLSFKSLQLEGVFSPLKDQKTFVS
SPKIKISPHGKHIATLDLTGSVNLFALDGDKHTFSLHTLGNCRHLIDVKDISWWTNNVLM
LVRADGSISMYSITENDVVSKDDPVLSTPLLEKAKATEGHAFILQSSRYERNTPANKQMD
SDLEPDLPSGSGEHQQTEMDKMFWSLLSFSKVTVTEMYSVMIRESRFEEALDFAFRYNLD
KDEVLKARWLHSDGDTHEIDSYLAKIKDQAFVLSECVNKVGPTEEALRALLSFGLHITDH
YKFSGLDNSSEGTTWDSRVIRLRLLRHRDMLETFLGINMGRYSAEEYSKFRSMPLVETAI
ALAESGKIGALNLIFKRHPYTISSDILRVLSAVPETVAVQTYSQLLPGTSPPSVVILRDG
DWVECEQMVSYISTCPTQLDKIGEIKTEILVKLSTGFSWPSVAELCDWYKNRARDIDCLS
GQLENCLATIELACQKGIVELQPFFDDIKCFYKVVYSNELNEFIMNIVTWEDLPGYEKFK
IILKGVKEDTVVQRLEENAIPFMKKRFHLISSSHEHKQEESYLVRWLKEVASENDLSICL
AVVENGCGESPIYGLFKDLAEMIETAVHCIYMCSATNQWNTMSSILSKLLHKTKREKSLL
ASEEECNLKDAKQPLGSSVVYYEEIQHVCADILSALGNGPDDFYHYDSVPYDLNNVKYLD
MLEKWLKVAEGHVEVGRLFAYYQVPKPIHFFLSAHLDEKNVKQLIRLLLSKFGRHQPVRS
DNEWANMWRDLKLFQEKAFPFLDSEYMLAEFIRGLLKAGKFSLARNYLGGTSAVSLSTEK
AENLVIQAAREYFFSASTLSGNEIWKARECLNLLPNSKNVQAETDIIDALTVRLPYLGVT
ILPVQFRQVKDPMEIIRMVITSQTGAYLHFEEIIDVAKLLGLRSEEEVAAVEEAIAREAV
VNGDLQLAFDICLNLTKKSHGAVWDLCAAIARGPPLDNLDSATREKLLGFSLSHCDEESV
GELLNAWKELDVHGKFEKLMIATGTNPPNVLIDGSSITPLPVQSVQDILDLRDDSGHDRH
KDHVEIVKEMLSKVCLDLSNGDAHTWESILVDNRKFLSFAVLELPWLLKLSNNELQDGEN
QTSRTDHTSRRYRFSTKVEAAISIIYWLALNGLAPNDDLIMILAKSIMEPPVDEEFDVLG
CSVLLNLMDPFNGVKIIEEELKRRECYQEISSIMSIGMLYSSLNNSKKECSTPEQRRNLL
LHKFHEKFTSDNTDDLDQIDMANTTFWREWKSKLEEEKQLADQARMLKQILPDIDTSLFL
SGDADYIKRVVFSFVDSVKLEKKHILKEAVKIAETYGLQRTEVLLRFLACSLVSEYWDNN
DILNEISEFREDIVRSAKGVIDMIYSDVYPEIDGYNKQRLSYIYGILSACHSYLKRTGEI
ELRYPEHVHTHKLEPFQYYKVLEEECKKVSFIDGLNYKNIAGLDNLNFEHFNEEVCKNIR
ASTITALADMVQDLVSMYVDVLAKGLISRQGVYKHYVLGLLASLEGRSEARSNCTDYEKL
QAVLCEIELNYDSCREYIQALPATDISYIVGRYCTLCFPSNLARSHPQEPSWKKPLATLL
TFWSKLVDDIPGESIDASSYEMTDYLNSNRLSLCMGTFRQLLIDDEITVHQGWDAISMYV
KDCLKSGMMMETSCFCRAMILSGCNFGAVVEVYYGGQGQLESESADPVNSLDLLELYNTV
TEECLSDLIEGSCEYRILFHQLLSSLSQSTGKHTGIQEMVRSGVWGKLIRFSEDMQLESQ
LRVYALQLMQCITGRNLKTLPKEIVSQVEPWESWYEHGTGAAIADESINSSSSITGTLVA
LRSTQMVAAFLADANITPENLATLDSAVSCFLHLSEHASAANVAVLEVVLEEWEQLFSPK
EEHVPPHESPKETSDWSDGWDDGWEALPEELEGPKNKQESAPLSIHPLHSCWMEIIRKCV
ELGELHKVIELLDRASSKHSVFLEEEEAHSLVELVSALDCFMALKVVLLLPYEALRLQCL
QMVEVKMREGTVSTSSNADDRQLLALVLSSGTIQKITTEEAYSKLFSYLCHLVGNLARSF
QTDLLMQWNDQATSKSDGSLLFGRVLFPCFISELVLRGQYLLAGLVISRWMHTHPSLGLM
DIAETSVRRFLKGQVTQAEQPQGGDASFTDDEVSVKHTISTLRLKLVSLLQAALSALPNQ
EV
NT seq
7389 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggggcggaagacgcgctgtacgagatccgccgccacgcgtcgggatcccac
gtgatccctcatttcttgcaaacgcagcaggaaggataccaaggtgccgcaacaagtagt
ggtagttcagacgccggaggaggggtcctctcctatctctccttgcaaggtgtgagcaag
cttagggagaggtggactaggtacagtgcgctggggaggagtacacagaggaagagggcg
gatggcgtggcattgttcgtctcgccaaatgcggaatatgtgtctgtaactgttgggaat
cgcatcatcatcttgaggaaacacgatgactatgcatcaccttgcggtgtttacacaaat
aatgacagaataacatttttcaccaatggggcttggctggaggcccaaggaatttttggt
gtggtggatgacctaagcacactctacttgatcaaagaaaatggggacttgttagcaagg
aggacatgcgatcagttgaaactatcttcttatattattgatctggttgttcaggatggt
tcaagcttgcttaggccgggcttctacatttttacgagtgactgcatggttcatagattt
gattacactcaagaacctgaggccagtttgtgtgaagttcctatatcaactaaagatgtg
atgtcagctaggactatgcagttacctcggagtttgtcgtgcattgattacgatcaacat
cactcactatttgtcctagctgcggattctaatatttcaattagctccaatagttattct
ggaacctattttctgtatctattacacgtcgatggaaatctggaacttagtctttcattt
aaaagcctgcagttggaaggagtgttttctcctcttaaggatcaaaaaacctttgtttca
tccccaaaaatcaagatctcacctcatggcaagcatattgctacgttggacttgactggc
tctgtaaacctctttgcacttgatggtgacaaacacaccttttcacttcatactcttgga
aactgtaggcatctaattgatgttaaggatatcagttggtggacaaataatgttctcatg
ttggtaagagcggatggtagtattagcatgtacagcatcaccgaaaacgatgtagtttcc
aaagatgacccagttttatctacaccactattggagaaggcaaaggctactgaaggacat
gcttttattttgcaatcgagcagatatgaaagaaatactccagctaacaagcagatggat
agtgacttggaacctgacctgcctagtggttccggggagcatcaacaaacggagatggat
aaaatgttttggagtcttctatcattctccaaagttacagtaacagaaatgtactctgtt
atgattagagagagtcgattcgaggaagccttagattttgctttcagatataatctagat
aaggatgaagttcttaaagcacgctggttgcattctgacggtgatactcatgagattgac
tcttacttagcaaaaattaaagaccaagcatttgtgttatcagaatgtgtaaataaagtt
gggcctacagaagaagctttaagggctctactttcatttggacttcatataactgaccat
tacaaattttctggattggataacagcagcgagggcacaacatgggacagtcgagtcatt
aggcttcgtttattgcggcacagagacatgttagagacattcttgggaattaatatggga
aggtactcagcagaagaatatagcaaattccgttcgatgcccctggttgaaactgccata
gctttagctgaaagtggaaaaattggggctttaaatcttatcttcaagcgccatccatat
actatctcttcagacattttacgagttttgtctgctgtcccagaaactgttgctgttcag
acctatagtcagttgctaccagggacatcccctcctagcgttgtcatattaagagatggt
gattgggttgaatgcgaacagatggtttcatatataagcacttgtcctacccagctggac
aagattggagagatcaaaactgaaatacttgtaaagctctcaacaggcttttcatggcct
tctgttgctgaactttgtgactggtacaagaacagagcaagggatattgactgcttgagt
ggacagctggaaaactgtcttgccacgatagagcttgcatgtcaaaagggcattgtagag
ttgcagccattctttgatgacattaaatgcttctacaaagttgtatattctaatgagctg
aatgagtttataatgaatattgtgacatgggaagatcttcctggttatgagaagttcaaa
atcatcctcaaaggagtcaaagaagatacggttgttcaacggctagaagaaaatgctatc
cctttcatgaagaagagatttcacctgatctcctcaagtcatgaacacaaacaagaagaa
tcctacctagtgagatggctgaaagaggtagcttctgaaaatgacctttccatttgctta
gctgttgttgaaaatggttgtggcgagtcaccaatatatgggctcttcaaggatcttgct
gagatgatagaaacagctgttcactgcatttatatgtgcagtgcaactaaccaatggaat
accatgtcatcgatattatcgaagttactccataaaacaaaaagagagaaatctttattg
gctagtgaagaagaatgcaatctgaaagatgctaagcaacctcttggttcttctgtggtt
tattatgaggagattcaacatgtgtgtgctgatatcttatctgctctaggcaatggccca
gatgatttttatcactatgattcagtaccttatgaccttaataatgtcaaatatcttgat
atgttggagaagtggctaaaagttgctgaaggccatgtggaagtagggcggctctttgct
tattatcaggtccccaaaccaatacatttcttccttagtgctcacttagatgagaagaat
gtaaagcaacttatacggctgcttctatccaaatttggcagacatcaacctgttcgatca
gacaatgagtgggctaacatgtggcgtgatttgaaactcttccaagaaaaagcatttcct
tttcttgattcagaatatatgctggcggaatttatcagagggcttttgaaagctggtaaa
ttttcactagccaggaattatcttggaggaacaagtgcagtttctttgtccacagagaag
gctgaaaatcttgtgatacaagctgcaagggagtatttcttctcggcgtcaactctgtct
gggaatgaaatttggaaggccagggaatgccttaacctgctacctaatagcaaaaatgtt
caagcagaaactgatataattgatgctcttactgttaggcttccttatctaggggtgact
atccttcctgttcagttcagacaggtaaaggaccctatggagattattcgcatggtgatt
acaagtcaaacaggggcatatcttcatttcgaagagattattgatgttgcaaaacttttg
ggattaagaagtgaagaggaagttgctgctgtggaggaggctattgccagagaagctgtg
gttaatggtgatcttcaactagcctttgatatctgtctaaatttaacaaaaaaaagtcat
ggtgcagtgtgggatttatgtgctgcaattgctagaggtcctccacttgacaatttggat
agtgctacccgtgaaaaactattgggcttctctcttagccattgtgacgaagaatctgtt
ggggaattattgaatgcatggaaggagcttgatgttcatggtaaatttgagaaattaatg
attgcgacgggaacaaatcctcccaatgtcttgatagatggaagttcaatcacaccactt
cctgtacaaagtgtgcaagatatactggacctcagagatgacagcggccatgataggcac
aaagaccatgtggaaattgttaaagaaatgttgtcaaaagtttgcttggacttgtcaaat
ggagatgcacatacttgggagtctatactggtagacaatcggaaattcttgtcctttgca
gtgctggaattaccatggcttttgaaattgtccaataatgaactgcaggatggtgaaaat
cagacttcaagaacagatcatacttctaggagatatcgattctcaacaaaagtagaagca
gcaattagcatcatatattggttagctctaaatggtttggctcccaacgacgatctaatc
atgattcttgcaaagtctataatggaaccccctgttgatgaagagtttgatgtacttggc
tgctcagttctgctgaatctcatggaccctttcaatggagtgaaaataatagaggaagag
cttaagagacgagaatgttatcaagaaatcagcagcataatgagtatagggatgttatac
agttccctcaacaattctaagaaagaatgttccactcctgagcagaggagaaatttgttg
cttcacaaatttcatgagaagttcacctcagacaatacagatgatttagaccagattgat
atggcaaatacaaccttctggagagaatggaaatcaaagttagaagaagagaaacaactg
gctgatcaagcgcgaatgctcaaacaaatattacctgatatagacacatccctattcttg
tccggcgatgctgattatatcaaaagagtagttttctcctttgttgactctgtaaagctg
gagaaaaaacacatactcaaggaagcagtaaagatagctgagacatatggcctgcaacga
actgaggtgcttttacggtttctcgcctgcagtcttgtctctgaatactgggataacaat
gatattctgaacgaaatttctgaattccgggaggacattgttagatcagctaagggtgtg
attgatatgatatattcagatgtctatccggagatcgatgggtataataagcaacgcctc
tcttacatttatggcattctttcagcatgccactcatatctgaagaggaccggtgagata
gaattgagatatccagagcatgtgcatacacataagcttgaaccatttcagtattataag
gtccttgaggaagagtgcaagaaagtctctttcattgatggcttgaattataaaaacatt
gctggattggataatctgaactttgagcatttcaatgaagaagtatgcaagaatatccgt
gcctctaccatcactgctctagctgatatggtacaagatcttgtgagtatgtatgtcgat
gttctagccaagggactcatatcacgacaaggtgtttacaagcactatgttctcggcttg
ctggcatcattagaaggccgcagtgaagcacgatcgaactgcacagattatgaaaagttg
caagctgtcctatgtgaaattgagttgaactatgatagttgcagggagtacatccaagct
cttcctgcaacagacatttcatatattgttggaaggtattgcaccctctgttttccatcc
aacttagcacgaagccatccacaggaaccttcatggaagaaacctcttgctacgctgcta
acattttggtctaaacttgttgatgacataccgggggagtcaattgatgcttcctcatat
gaaatgacagactacttaaattcaaataggttatccctgtgcatggggactttcaggcag
ctcttgatagatgatgagataacagtgcaccaaggctgggatgccatctccatgtatgta
aaagattgccttaaaagtggtatgatgatggaaacatcatgcttttgtcgagctatgatt
ctatcaggctgtaactttggagctgtagttgaagtatactatggaggacagggacaattg
gagagtgagagtgcagatcctgttaattctttggatctcttagaactttataatactgtt
acagaagagtgtttgtcagatttgattgagggctcttgtgaatatagaatattgtttcat
cagttgctgtcatctttgagccagtcaacggggaaacacactggcatccaagaaatggtc
agatctggtgtttgggggaagttaatccgcttttctgaagacatgcagctagagagccaa
ttgagagtctatgctctgcagctgatgcaatgtatcacaggaagaaaccttaaaactctt
ccaaaggagatagtgtcccaggttgagccatgggaatcatggtatgagcacggaacaggt
gctgccatagctgatgagagtatcaactcctctagcagcatcactgggactcttgtggca
cttagatctactcagatggtcgctgcttttcttgctgatgctaatatcactccagaaaac
ctagcaactcttgactctgcagtatcttgtttcttacatttgtcagaacatgcttctgct
gcgaacgttgcagttttggaagtagtattagaagagtgggagcaactattctcccccaaa
gaagagcatgttccgcctcatgaatcaccaaaagaaacaagtgactggagtgatggatgg
gatgatggatgggaggccctaccagaagagttagaaggtccaaagaacaaacaagagagt
gcaccgttatctatccatcctctccacagttgttggatggagattatcagaaaatgtgta
gagcttggtgagctgcacaaggtcattgaacttctggaccgagcatcttcgaaacatagc
gttttcctagaggaagaagaagctcatagcttggttgaacttgtatctgctctggactgc
ttcatggctctcaaagttgtccttttacttccatacgaagctctaagactgcagtgcctg
cagatggttgaggtgaaaatgagggaaggaaccgtgtcgacctcatcaaacgctgatgat
cgtcagctccttgccttggttctgtcatctggaactatccaaaagatcacaacggaagag
gcatactccaagttgttctcttatttatgccatcttgttgggaatcttgcaaggtcattt
cagactgatctccttatgcaatggaacgatcaagccacatccaagagcgatggatcttta
ctctttggtagggttttgtttccatgtttcatatctgaactggtcctcagaggtcagtac
ctgttggctgggctcgtcatctccagatggatgcacactcatccgtccctgggtctgatg
gatatcgctgagaccagcgtacggcgattccttaaaggtcaggttacccaagctgagcaa
ccacaagggggtgatgcttctttcactgacgatgaagtgtctgtgaaacacacaatctcc
actctgcgattgaaacttgtttctcttctgcaagctgcattgtcggctcttccaaaccaa
gaggtatag
DBGET
integrated database retrieval system
