Panicum virgatum (switchgrass): 120663887
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Entry
120663887 CDS
T07260
Name
(RefSeq) WPP domain-interacting tail-anchored protein 1-like isoform X1
KO
K27867
WPP domain-interacting tail-anchored protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120663887
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
LINC complex
120663887
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tropomyosin
GAS
CENP-F_leu_zip
ADIP
DUF745
NPV_P10
DUF4200
Csm1_N
DUF1664
Crescentin
Motif
Other DBs
NCBI-GeneID:
120663887
NCBI-ProteinID:
XP_039798761
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Position
3N:5458815..5469500
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AA seq
668 aa
AA seq
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MDTVINRDGSDFHGGALSYGDAMNTGGSNVEILTRVELDLAFASEKLLNLEMLVMEIARR
ATDFEPATFEDESVSSETAENAFELDILYGILDAEVKELTDLISSLQADIKSIEHKVFEE
ESGGKVKAKLDAATVTLKQMQELIADIRNESAKFEKAIQFFHETEGDEGVGCENGHMSYQ
TGMQTEDQHRNVLHMLEQSIASELDLEKKLSDSKSVIEDLKLKLHHQEKEIYFLEESAET
VSGRTFEAENASDLLLGTSKELANRLNTMEFNLSAQKCREDDLKSKLEQSLTKLSFLENS
PDKMEQKINKVGADSISLQDRIQELEKQLSESNSQLQSAMESAKTSQEEQNALHSELSTL
ENTIKNLKDDVSRAECRAHNAEIRCMQLTQDNIELNGELSTLKSEKSDKVNLLEKRLKES
NTQLEHANAAVDAIVEQQGMLKSTMSDMEHMIEDLKGKVSKAETRAGSAESKCTLLTDTN
LELSEELAFLRGRVESLENLLREANLAKVSTAKDIGIRTKIITDLVRKLALERERLHLQI
ATLTKKNKILAQKYKERINVSTQVSKKATAKQTELQSTEKAEEIFPDSSSSQTEADKPAD
LLYKDEVKAHTPAEDASTSEDDSSLDDTHETVRTIEPSLLNRKYVFVSFLVLLAAAVVFL
LHKDGSPA
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggatactgtgatcaacagagatggtagcgatttccatggaggcgccctgtcatatgga
gacgcaatgaacactgggggaagcaatgtagaaatcctcactagagtcgagcttgatctt
gcatttgcctctgagaaattactgaacttggagatgctggtcatggaaatagctcggcga
gctaccgactttgagcctgctacattcgaagacgaatctgtttcttccgagactgcagag
aatgcttttgaattggatatcttgtatggtattcttgacgcagaggtcaaggagttaacc
gacttgattagttcgcttcaagctgatatcaaaagtatagagcataaggtttttgaggaa
gagtccggaggcaaggtcaaagctaaactggatgctgctacggtgaccttgaagcagatg
caagagctaattgctgatattaggaatgagtctgcaaagtttgagaaagccatacagttt
ttccatgaaacagaaggggatgaaggtgttggatgtgaaaatggccatatgtcatatcaa
actggtatgcagacagaagatcaacacagaaatgttttgcatatgttagaacaatccata
gcaagtgagctagatcttgaaaagaagctttctgattcaaaatctgtcatagaagatctc
aagctgaagctccatcatcaggaaaaggaaatatatttcctggaggaatcagctgaaaca
gtttcaggtagaacattcgaagcagaaaatgcttctgatttacttttgggaacttcaaag
gaacttgcgaataggcttaataccatggagttcaatttaagtgcgcaaaaatgtagggaa
gatgatctaaagtcaaaattagaacaaagtttgacaaaactatcttttctggaaaatagc
cctgataagatggaacaaaagatcaacaaagttggagctgattcaatttcgctgcaggat
aggatccaggaattagaaaaacagttgagcgaatccaattcccaactgcaatctgcaatg
gaatcagcaaaaacaagccaggaagagcaaaatgcattgcactctgagctgagcacattg
gaaaatacaattaagaatctcaaagatgatgtctctcgagccgaatgtagagcacataat
gctgaaataaggtgtatgcagctaactcaagataatatagagcttaatggggagctaagt
actcttaaaagcgaaaagtcagataaagtaaaccttttggagaagagacttaaagagtca
aatacccaattagagcatgcaaatgcagcagttgatgccattgttgaacagcagggtatg
ctgaaatcaacgatgtctgatatggaacatatgattgaagatctgaagggcaaagtttca
aaagctgaaactagagctgggagtgctgaatcaaagtgcacacttttgacagacacaaat
ttagaacttagtgaagagctagcatttctaagaggtcgagtagaaagtctagagaacttg
ctacgtgaagctaaccttgcaaaggtgtctactgccaaggacattggtatcagaactaaa
atcattactgatttggtcagaaaactggcactggaaagagaacggcttcatcttcagatt
gctacgttaacaaagaagaacaagatattggcccagaagtacaaagagcgtattaatgtt
agcacacaagtgagtaaaaaggctactgccaaacaaactgaacttcagtccactgaaaaa
gctgaggaaatatttccagattcatcatcatcacaaactgaggctgacaaaccagcagat
cttctctacaaggatgaagttaaggcgcacactccagcagaggatgcctccacttcggag
gatgactcctcattggatgacactcatgagacagtgcgaaccatagagccatcactactg
aaccggaaatatgtttttgtgtcatttctagtcttgttggctgctgctgttgtattcttg
ctccacaaagatggcagcccagcatga
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