Panicum virgatum (switchgrass): 120663914
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Entry
120663914 CDS
T07260
Name
(RefSeq) ER membrane protein complex subunit 1-like
KO
K23562
ER membrane protein complex subunit 1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120663914
Membrane trafficking [BR:
pvir04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
ER membrane protein complex
120663914
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EMC1_C
PQQ_2
Motif
Other DBs
NCBI-GeneID:
120663914
NCBI-ProteinID:
XP_039798795
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All DBs
Position
3N:complement(5695202..5704048)
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AA seq
988 aa
AA seq
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MAAPPRRPLLILLAGLLLVASLATLAEAIYEDQVGLADWHQKYIGKVKQAVYHSQKSGRR
RVVVLTEENVISSLDLRSGDIFWRHIIDKNDPLDQLSLSFGKYVLTLSSGGTILRAWNLP
DGQMIWETNLQTSTASDPQLHVMPNSKVAKDNLVLVSAGRWIYAVSSIDGSISWEKEFSL
DGLEIKQVLQSPENDIVYAVGIAGSSKLALYHLSTKTGEVLKDIQESLPGELSGEIVLGS
DDVLVALNKARSSLFLIEFNSGRISYNKVHVSDLVQDLSGTFKLQSVSNGVIALQTPSTV
SLLKLKDTDGLEVVQRFDQPAALSDALTIAEKDEAFAVVRHVGSQIEFIVKFTSDVSGEI
IREKVIIDQHRGNVEKVFLNSYIRTDKSHGFRALVVMEDHSLLLIQQGEVVWSREDGLAS
IVDVTTSELPVEKDGVSVADVEHNLFEWLKGHMLKLKGTLMLANADEVAAIQALRLKSSE
KNKMTRDHNGFRKLLIVLTKAGKVIALHTGDGRIIWSNLLPSLRASRFGVMPSALRIYQW
QVPHHSVMRENPSVLVVGKSGAESSAPGVFSILDSYSGEELNAMRLDHSVVQIIPLTLKD
LSEQRLHLIVDSNSNAHLYPKSPDALDVFLNEMPNLYFYSVDILANVIRGYSLQKSCDIE
GDEYCFSTKELWSIIFPSDSERIAISETRKMNEVVHTQAKTIGDHDVMYKYLSKNLVFVA
TVSPKAAGDIGSALPEEASLVAYLIDAVTGRILHRVTHHGAQGPVHAVLSENWVVYHYFN
LRAHRFEMAVIEIYDQSRADNKDVMKLILGKHNLSAPITSFARPEVVVKSQSYFFTHSVK
AMAVTQTAKGITSKQLLIGTISDQVLALDKRFLDPRRSANPTQQEKEEGIIPLTDSLPII
PQSFVTHSHQVEALRGIVSIPAKLESTTLVFTYGVDLFYTQLAPSRTYDSLTDEFSYALL
LITIAVLVAAIIVTWIWSEKKELRDKWR
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgccgccgcgccgccccctcctcatcctcctcgccgggcttctcctcgtcgcc
tcactcgccaccctcgccgaagccatctacgaggaccaagtcggcctcgcggactggcat
cagaagtacattggaaaagtaaagcaagcagtttaccatagccagaagagtggaaggagg
cgcgttgtggtcttgacagaggaaaatgtgatctcttctcttgatcttcgttcaggagat
atattttggcgacatatcattgacaagaatgaccctttggatcagcttagtctatcattt
ggaaaatatgttctaactctttcttcgggaggaactatattgagggcatggaatcttcca
gatggacagatgatctgggagacaaaccttcaaacttctacagcatcagacccacagctg
catgttatgccaaacagtaaagtggcaaaggataatttggttttagtttcggctggacga
tggatttatgctgtatcaagcattgatggatcaatttcatgggaaaaggagttttctctt
gatggcttagaaatcaagcaggttctccagtcgcctgagaatgatattgtgtacgctgta
ggaattgctggttcctcgaagctagctttgtatcacttgagtactaaaactggcgaggta
ctaaaggatatccaagagtcactccctggtgaattatctggggaaatagtactcggttct
gatgatgttttggtagcattgaataaggcaaggtcaagcctgtttcttattgagtttaat
agtggaagaattagctacaacaaggtgcatgtttcagatcttgttcaagacttatctgga
acattcaaacttcaatctgtgtccaatggtgtcatagctttgcaaacaccttctactgtt
tccctcctaaaactcaaagatactgatgggttagaagtagttcagagatttgaccaacca
gctgcattgagtgacgccctaacaattgcagaaaaagatgaagcttttgctgtcgtccga
catgtggggtcccaaattgaatttatcgtgaaatttacaagtgatgtaagcggtgaaatt
attagagaaaaagtcattattgatcaacatcggggcaatgttgagaaggtcttcttgaat
agttatattcgaactgacaaatctcatggttttcgagctttggttgtaatggaagatcat
tcactcttattaattcaacaaggtgaggttgtttggagcagagaggatgggcttgcttca
attgttgatgtaacgacgtcagaattgcctgttgagaaggatggcgtctcagttgcagat
gtcgaacacaatctctttgagtggcttaagggacacatgcttaaactcaaaggaactcta
atgcttgcaaatgctgatgaagtggctgcaatccaagcactgagactcaaaagctctgag
aaaaataagatgacaagagatcataatggatttcgtaaacttcttattgtactgacaaag
gctggcaaagtgatagctctgcacactggagatggccgcattatctggtcaaatttgctg
ccatcccttcgtgcctccagatttggtgtgatgccttctgccttaaggatataccaatgg
caggtcccacatcacagtgtaatgcgggagaacccatcagtacttgttgttggcaaatct
ggagcagaatcttctgcacctggtgtcttctctattcttgattcatattctggagaagaa
ctgaatgctatgaggcttgaccattctgttgttcaaattatccctttgacactgaaggat
ttatctgagcagcgacttcatctgattgttgattccaattccaatgctcacttgtatcca
aaatctcctgatgcccttgatgtatttcttaatgaaatgccaaacctgtatttctattct
gtagatattttggcaaatgttattagaggatattcattacagaagtcatgtgatatcgaa
ggtgatgagtactgcttcagtacgaaggagttatggtcaatcatttttccatctgattct
gaaaggattgctatctctgaaacgcgaaagatgaacgaggttgttcatacacaagctaag
acaattggtgatcatgatgtgatgtacaagtatttatcaaagaatttagtttttgttgct
actgtgtctcctaaagctgctggtgatattggatctgcgctgcctgaagaagcctcgctt
gttgcatatcttattgatgcagtcacgggtcgcatactgcatcgtgtgactcatcatggt
gcacaaggccctgtacatgcagttttaagcgagaactgggttgtctatcattattttaat
cttcgagctcatagatttgagatggcagtgattgagatatatgatcaatctagagcggac
aataaagatgtcatgaagctcatacttgggaagcataatctctcagcaccaatcacatct
tttgcccgtccagaggtggtggtaaaatcccagtcatactttttcacccattcagtaaaa
gcaatggcagttacacaaacagctaaggggattacttccaagcagcttctgattggcacg
atcagtgaccaggttttggcacttgataagcgtttcctcgatccacgtcgttcagcgaat
cccacacaacaagaaaaagaagagggcattataccattaacagattctttgccaataatt
ccccagtcctttgtgacgcattctcatcaagtggaagccctacgaggaattgtttctatt
cctgcgaagttggagtccactactcttgttttcacatacggcgttgatctgttctacacc
cagcttgctccgtcaagaacctatgattccctcactgacgaattcagctatgcgcttctt
ctaatcacaattgcggtcttggttgctgccattattgttacttggatttggtccgagaaa
aaggagttgagagacaagtggaggtga
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