Panicum virgatum (switchgrass): 120663925
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Entry
120663925 CDS
T07260
Name
(RefSeq) probable calcium-binding protein CML18
KO
K13448
calcium-binding protein CML
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
120663925
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_FSTL1
EF-hand_9
Allatotropin-like_C
Dockerin_1
AIF-1
CFAP251_C
SPARC_Ca_bdg
EF_EFCAB10_C
T2SSK
AAA_SpoVK_2nd
Motif
Other DBs
NCBI-GeneID:
120663925
NCBI-ProteinID:
XP_039798808
LinkDB
All DBs
Position
3N:5866385..5867545
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AA seq
173 aa
AA seq
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MASVKQGGDAAKAAGGGGGLGMPAAEVEQVFRRYDANGDGKISAEELASVLRALGAPPGP
GEVRRMMDEMDADRDGFVDLAEFVAFHCGAQPAEGQDDGAAEAELREAFRMYDADRNGLI
SARELHRVLRQLGDKCSVADCSRMIRSVDADGDGSVNFDEFKKMMGAGAGARR
NT seq
522 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgtcaagcagggcggggacgcggcgaaggcggcgggaggcggaggggggctt
gggatgccggcggcggaggtggagcaggtgttccggcgctacgacgccaacggcgacggc
aagatctcggcggaggagctggcgtccgtgctgcgggcgctgggcgcgccgccggggccc
ggggaggtgcgccgcatgatggacgagatggacgccgaccgcgacggcttcgtcgacctc
gccgagttcgtcgccttccactgcggcgcccagccggcggaggggcaggacgacggcgcc
gcggaggccgagctgcgggaggccttccgcatgtacgacgccgaccgcaacggcctcatc
tccgcgcgggagctccaccgcgtcctgcgccagctcggggacaagtgctccgtcgccgac
tgctcccggatgatccgctccgtcgacgccgacggcgacggcagcgtcaacttcgacgag
ttcaagaagatgatgggcgccggcgccggagccaggcgctag
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integrated database retrieval system
