Panicum virgatum (switchgrass): 120663935
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Entry
120663935 CDS
T07260
Name
(RefSeq) (E)-beta-caryophyllene synthase-like isoform X1
KO
K15803
(-)-germacrene D synthase [EC:
4.2.3.75
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00909
Sesquiterpenoid and triterpenoid biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
120663935
Enzymes [BR:
pvir01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.3 Acting on phosphates
4.2.3.75 (-)-germacrene D synthase
120663935
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GFIT
Motif
Pfam:
Terpene_synth_C
Terpene_synth
Terpene_syn_C_2
BCDHK_Adom3
Motif
Other DBs
NCBI-GeneID:
120663935
NCBI-ProteinID:
XP_039798820
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All DBs
Position
2K:6549986..6552733
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AA seq
547 aa
AA seq
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MASPMITLAPQSQCNQFREYSPSPWGDFFLNHATCTPSQLLTMKERAQVKEENVRRIILE
SFASSDLAQKLELVDTLQRIGVDYHYKKEINDLLYSIYNDEDGGSDDLYVTSLRFYLLRK
HGYTVSADVFEKFRDKQGNISSDDVSCLLMLYDAAHVRTHGEEILDDMITFNKSRLQSLT
MKNLEPELAEEVRCTLETPRFRRVERVEARLYISVYEKKAVHDGTILEFAKLDYNILQAI
YCDELKELTIWWKDLHSKTDLSFARDRMVEIHFWILGTIYEPYYSYSRIVVTKFTLLASL
LDDLYDNYCCTTEESTIFNTAIERWDEQTTEEFPAHLKPLLIGILDTTNKIEEELKLQKN
RHAEVVKKLVICTAKFYHAEVNWRDEHYVPATVDEHLEKSLRSSVCMQIIIGVLISLRDC
REDDVNWAFTFPKLIRGVSVVGRVGNDIVSDEREQASEHVVSTVQTCMKQYGITAEQANE
KLRVIIEEAWMDIVQEYLDQKRPREFLEKSVDVARTMDFFYKRDDAYTLPLSIKDTITLM
YVNPCEL
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgccgatgatcaccctcgccccgcagtcacagtgcaaccagttccgggagtac
agccccagcccctggggtgacttcttcctcaaccatgccacatgcactccatcacagctc
ttgacaatgaaggagagggcacaggtaaaggaggagaacgtgaggaggattatactggaa
agctttgcctcctccgacctggctcagaagctggagctcgttgacactctacaaaggata
ggggtggactaccactacaagaaggagatcaatgacctactttattctatctacaatgac
gaggatggaggttctgatgacctctatgtcacctcattgaggttctatttgcttaggaag
catggatacaccgtctctgcagacgtgtttgagaagtttagggacaagcaagggaacatt
tcaagtgacgatgtcagctgcttgctaatgttgtatgatgctgcacatgtgagaactcat
ggggaggagatactcgacgacatgatcactttcaacaagagccgcctccaatctttgacg
atgaaaaatttggagccagagctggcagaggaagtgcgatgcacattggagacaccacgg
ttcaggcgggtcgagagggtggaggcaaggctctacatctcagtgtacgagaagaaggct
gtgcatgatgggactatactggagtttgcaaagctggactacaacatcttgcaggctatc
tactgtgatgagctgaaagaacttacaatatggtggaaggatttacactcaaagacagac
cttagcttcgcacgagacagaatggtggagatacatttttggattctcggaacaatttat
gagccctattactcatattcgcggatagtggtgacaaagttcaccctgttagcgtcattg
cttgatgacctttatgacaactattgttgcaccacagaggagagtactatcttcaacaca
gccatagaaaggtgggatgaacaaaccacagaggagttcccagcacatctgaagccactc
ctcatcggcatacttgacactacaaataagattgaggaggagttaaaacttcagaaaaac
aggcatgctgaagttgtcaaaaaactagtgatctgcactgccaaattctaccatgctgag
gtgaattggcgcgatgaacactatgtaccagctactgttgatgagcacctcgaaaaatcc
ttgcgtagtagtgtctgtatgcaaataataattggtgtgctcatttcactaagagattgt
cgggaggatgatgttaattgggcattcacctttcccaaacttatcagaggtgtttctgtt
gtggggcgcgttggaaatgacatcgtgtcagatgagcgggaacaagcttcggagcatgtg
gtatccacggtgcaaacttgcatgaagcaatatgggataacagcagagcaagccaacgaa
aagcttagagtcataatcgaagaagcatggatggacatcgtccaggaatacctcgaccag
aagcgacctagggagtttcttgagaagtcggtcgatgttgcacgaacaatggatttcttt
tacaagcgtgatgatgcgtacaccttgccgctcagcatcaaggacactataactttgatg
tatgtgaatccgtgtgagctgtag
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