Panicum virgatum (switchgrass): 120663953
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Entry
120663953 CDS
T07260
Name
(RefSeq) endoglucanase 15-like
KO
K01179
endoglucanase [EC:
3.2.1.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00500
Starch and sucrose metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
120663953
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.4 cellulase
120663953
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_9
CBM49
Motif
Other DBs
NCBI-GeneID:
120663953
NCBI-ProteinID:
XP_039798841
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Position
3N:6092042..6094831
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AA seq
628 aa
AA seq
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MARNVMPLLGILALASAVGMASAAGGHDYALALKKSILYFEAQRSGVLPPNQRVTWRENS
GLFDGKANGVDLVGGYYDAGDNVKFGLPMAFTVTMMSWGILEYGKQMAAAGELRNAMDAV
KWGTDYFIKAHPEPDVLYGEVGDGDTDHSCWQRPEDMSTSRQAFRIDPQNPGSDLAGETA
AAMAAASLVFRNTYPGYANLLLEHSKQLFTFADKYRGKYDASITVARNYYGSFSGYGDEL
LWAAAWLYEATEEGCYLEYLARNGDALGGTGWSINQFGWDVKYPGVQVLAAKFLLEGRAG
AHAATLQRYRQNAEFFVCSCVGKGAVNVPRTPGGMMYHQRWNNLQFVTSASFLLTVYADY
ATRLPGSGGGGVRCPGGAARPYEILAFVRSQVNYILGDNPRGTSYMVGYGGSFPRQVHHR
GASIVSVRKDPSFVSCQEGYSSWYPRQAGNPNVLEGAVVGGPDEYDDFADERNNYEQTEA
ATYNSAPLLGVLARLSGACGTGLEEYQLPPAAAVNQTTSSPHRRRRPHHGPPSPIEIEQN
ATRTWATRRATYRRYSVTVTNRSRKTVRELHLGVSELRGRLWGLDEARYGYVPPKWLPAL
RAGESLRFVYVQPGTTPANVWVTGYKLV
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggccaggaacgtgatgccactccttggcatcttggcacttgcatcagcggtggggatg
gcttccgcggccggcggccatgactacgccctggcattgaagaagagcatcctctacttc
gaggcgcagcgctccggcgtgctcccccccaaccagagggtcacctggagagagaactcc
gggctctttgacggcaaggccaatggggtggaccttgtgggagggtattatgatgcaggg
gacaacgtcaagttcggcctgcccatggcgttcacggtgacgatgatgtcgtggggcatc
ctggagtacggcaagcagatggcggcggccggcgagctgcgcaacgccatggacgccgtc
aagtggggcaccgactacttcatcaaggcccacccggagcccgacgtgctgtacggcgag
gtgggcgacggcgacacggaccacagctgctggcagcggcccgaggacatgtccaccagc
cgccaggcgttccgcatcgacccccagaaccccgggtccgacctcgccggagagaccgcc
gccgccatggccgccgcgtcgctcgtgttccgcaacacctatcctggctacgcgaacctg
ctcctcgaacattccaagcagctgttcacgttcgccgacaagtacagggggaagtacgac
gccagcatcaccgtcgcccggaactactacggatccttcagcggatacggggacgagctc
ctgtgggcggcggcgtggctgtacgaggcgacggaggaagggtgctacctcgagtacctt
gcccgcaacggcgacgcgctcggcggcaccggctggtccatcaaccagttcggctgggac
gtcaagtaccccggcgtgcaggtcctggcagccaagttcctcctcgagggccgcgccgga
gcgcacgcggcgacgctgcagcggtaccggcagaacgcggagttcttcgtgtgctcgtgc
gtcggcaagggcgccgtgaacgtgccgcggacgcccggcggcatgatgtaccaccagcgc
tggaacaacctccagttcgtgaccagcgcgtcgttcctgctgacggtgtacgcggactac
gcgacgaggctgccgggctccggcggcggcggcgtgcggtgccccggcggcgcggcgcgg
ccctacgagatcctcgccttcgtgaggtcgcaggtgaactacatcctgggcgacaacccg
cggggcacgagctacatggtcgggtacggcggcagcttcccgcggcaggtgcaccaccgc
ggcgcctccatcgtgtccgtcaggaaggacccctccttcgtgagctgccaggagggctac
tccagctggtacccgcggcaggccggcaaccccaacgtcctggagggcgccgtcgtcggc
gggcccgacgagtacgacgacttcgccgacgagcggaacaactacgagcagacggaggcc
gccacctacaacagcgcgccgctgctcggcgtcctcgcccgcctctccggcgcctgcggc
accgggctggaggagtaccagctgccgcccgccgccgcggtgaaccagacgacgtcctcg
cctcaccgtcgccgccgccctcaccacgggccgccgtccccgatcgagatcgagcagaac
gcgacgaggacgtgggcgacgcggcgcgcgacgtaccgccggtactcggtgactgtgacc
aaccggtcgaggaagacggtgcgggagctccacctcggcgtctcggagctccgcggccgg
ctgtggggcctcgacgaggcgcggtacgggtacgtgccgcccaagtggctgccggcgctg
cgcgccggcgagagcctcaggttcgtgtacgtccagccggggacgacgccggccaacgtg
tgggtcaccggctacaagctggtctga
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