Panicum virgatum (switchgrass): 120664043
Help
Entry
120664043 CDS
T07260
Name
(RefSeq) myb-related protein MYBAS1-like isoform X1
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120664043
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120664043
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
DUF3683
Motif
Other DBs
NCBI-GeneID:
120664043
NCBI-ProteinID:
XP_039798939
LinkDB
All DBs
Position
3N:7400144..7401769
Genome browser
AA seq
286 aa
AA seq
DB search
MFMFGRNKKLDGQHQQQITGCGGAAPAAAMRKGPWTEEEDAQLVRFVRLFGERRWDFLAK
VSGLRRTGKSCRLRWVNYLHPDLRRGRITADEERLIVQLHAQWGSRWSRIARSLPGRTDN
EIKNFWRTRTRKKALEERQHSSGSNKTAASPLSSMTTASCCPGSPNSGADTQSSSAAPSG
DDSAIREGSGGDDAELEEASTATAAASQHEEPQEYCCTVDQLWTEIAAADAAASYVLDGW
GSGHCYYSAAAEPPPMPSSPVWEYSSDYSLWRIDDEEYYREMLDAS
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgttcatgttcggcaggaacaagaagctggatggccaacaccagcagcagatcaccgga
tgcggcggcgcggcgccggcggcggcgatgaggaagggcccctggacggaggaggaggac
gcgcagctggtacggttcgtccgcctgttcggcgaacgccgatgggatttcttagcaaag
gtgtcaggtctgaggcgcaccggcaagagctgccgcctccggtgggtcaactacctccac
ccggacctccgccgcggccgcatcaccgccgacgaggagcgcctcatcgtccagctccac
gcgcagtggggcagcaggtggtcgcgcatcgccaggagcctccccggccgcaccgacaac
gagatcaagaacttctggaggacgcgcaccaggaagaaggcgctcgaggagaggcagcac
agcagcggcagcaacaagacggcggcgtcgcctctttcctctatgacgacggcctcctgc
tgcccgggctctccgaacagcggcgccgacacgcagtcctcgtcggctgcgccgtccggc
gacgattcagcgatccgtgaaggcagcggcggcgacgacgccgaactcgaggaggcgtcg
acggccaccgccgcggcgagccagcacgaggagccgcaggagtactgctgcacagtggac
cagctgtggaccgagatcgcggcagccgatgcggcggcgagctacgtgctcgacggctgg
ggatctggccattgctattatagcgctgccgctgagccaccgccgatgccgtcgtcgccg
gtgtgggagtacagctcggattattcgctctggaggatcgatgacgaagaatactacagg
gagatgctcgacgcctcctga
DBGET
integrated database retrieval system
