Panicum virgatum (switchgrass): 120664092
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Entry
120664092 CDS
T07260
Name
(RefSeq) transcription factor IIIA-like isoform X1
KO
K09191
general transcription factor IIIA
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120664092
03021 Transcription machinery [BR:
pvir03021
]
120664092
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
120664092
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIA
120664092
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_5
CCAP
Zap1_zf1
zf-H2C2_2
zf-met
zf-C2H2_jaz
Motif
Other DBs
NCBI-GeneID:
120664092
NCBI-ProteinID:
XP_039799028
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All DBs
Position
3N:7979505..7984723
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AA seq
375 aa
AA seq
DB search
MGDGAETGGGDGATTAARAGAPRRDIRRYKCEFCGVVRSKKSLIRAHVLQSHKDEVDGLE
DYQEGGKCASRKEVSHDCKECGMRFKKPAHLKQHMQSHSLERPFVCHVDGCPLSYSRKDH
LNRHLLTHQGKLFVCPIEGCDCKFNIKGNMQRHVQEIHKDGSPCESKKEFICPEVNCGKT
FKYASKLKKHEESHVKLDCTEVICCEPGCMKTFTNVECLKAHNQSCHQHVQCDVCGTKQL
KRNFKRHRQMHEGSCITERVKCRFDDCKCSFSKKSNLEKHVKAVHEQRRPFVCQFSGCGK
KFSYKHVRDIHEKSSAHVHTEGDFVEADEQRLRSAGGRKRKPVSVETFMRKRVAAPDDAP
AHVDGTEYLRWLLSG
NT seq
1128 nt
NT seq
+upstream
nt +downstream
nt
atgggggatggggcagagactggcggcggtgatggcgcgaccacggcggcgagggcgggg
gcgccgcggagggatatacgtcggtacaaatgcgagttctgcggcgtggttcggtccaag
aagagtttgatccgcgcccatgtcctccagagccacaaggatgaagtggatggtctggag
gattaccaggaaggaggaaaatgtgcttcgcgcaaggaggtcagccatgactgcaaagag
tgtggcatgaggttcaagaagccggcccatctgaagcagcacatgcagagccattcactc
gagagaccctttgtttgccatgtagatggttgtcccttaagttatagcagaaaggaccat
ttgaacagacatctacttactcatcaagggaaactatttgtgtgccccatcgaaggatgc
gactgtaagttcaatatcaagggtaatatgcagagacatgtccaggaaatccataaagat
ggttctccttgtgaaagcaagaaggaattcatttgtccggaggttaactgtgggaagact
ttcaaatatgcttccaagttaaaaaagcacgaagaatcacatgtcaaactggactgcaca
gaggttatctgctgtgaaccaggctgcatgaaaacttttacaaatgtggaatgcctcaaa
gcacataaccaatcctgccatcaacatgttcagtgtgatgtctgtggtactaaacaacta
aagaggaattttaagcgtcatcgccaaatgcatgaaggctcctgcattactgaaagggtc
aaatgccgctttgatgactgcaaatgttcattttcaaagaaatccaatttggagaagcat
gttaaggcggtccatgagcagcgccgacctttcgtttgccaattctctgggtgtggcaag
aagttttcttacaagcatgtaagggacatccatgagaagtctagtgctcatgtgcacact
gagggtgattttgttgaggcggatgaacagcgactgcgttcagcaggggggcgaaagaga
aagcccgtatctgtcgagactttcatgcggaagagggtagctgctcctgatgatgcacct
gctcatgttgatggaactgagtatctgagatggcttctctccggttga
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