Panicum virgatum (switchgrass): 120664146
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Entry
120664146 CDS
T07260
Name
(RefSeq) metal tolerance protein 1 isoform X1
KO
K14689
solute carrier family 30 (zinc transporter), member 2
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120664146
Transporters [BR:
pvir02000
]
Solute carrier family (SLC)
SLC30: Zinc efflux transporter
120664146
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GFIT
Motif
Pfam:
Cation_efflux
ZT_dimer
Zip
DUF5134
Motif
Other DBs
NCBI-GeneID:
120664146
NCBI-ProteinID:
XP_039799110
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Position
3N:complement(8525142..8528949)
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AA seq
523 aa
AA seq
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MEFCRTDGALLIDLGERTNAAVGVTARDQNESSFRRSDNYVGVNCRSFSPHYSSGLRFRW
SSPLVRDRATWWIGSLSRVGSAGSIVSSCCSATSLLSCHVKCHRCVMESHSSSHPQIAEV
KMDISPSASGAAGNKICRGAACDFSDSSNSSKDAKERSASMRKLIIAVILCIVFMTVEVV
GGIKANSLAILTDAAHLLSDVAAFAISLFSLWAAGWEATPQQSYGFFRIEILGALVSIQL
IWLLAGILVYEAIVRLINESGEVQGSLMFAVSAFGLFVNIIMAVLLGHDHGHGHGHGHGH
SHDHSHGDSDDDHSHHEEQEQGHVHRHEHSHGSSITVTTHHHHHPSTGQHHDAEEPLLKH
EASCEGTQSAAKPAKKPRRNINVHSAYLHVLGDSIQSIGVMIGGAIIWYKPEWKIIDLIC
TLIFSVVVLFTTIRMLRNILEVLMESTPREIDATRLEMGLCEMDGVVAVHELHIWAITVG
KVLLACHVTIAREADADQILDKVIGYIKTEYNISHVTIQIERE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggagttttgtcggacggatggtgctttgttgattgatttgggggaaaggacgaatgcc
gcggtcggggtcacggcgagggatcaaaacgaatcttcattccgtcgatccgacaactac
gtgggcgtcaattgccggtcgttttctccgcattattcttcaggactgcgattccgttgg
tcttccccccttgtccgggaccgcgcgacgtggtggataggttcactcagtagggtaggg
tcggctggttccatcgtatcatcatgctgctcggctacttcgcttctttcatgtcatgtc
aaatgccaccgctgcgtgatggaaagccatagttcatcacatcctcagattgctgaagtg
aaaatggacatctcaccatcagcttctggagcagcagggaacaaaatctgcagaggtgct
gcctgtgatttctctgattccagtaacagctcgaaagatgccaaggagagatccgcatcc
atgaggaagcttataattgctgtgatcctttgcatcgtattcatgacagtggaagtggtt
ggaggcatcaaagcaaacagtcttgcaatcttaactgatgcagctcatcttctttctgac
gtggcagcttttgccatatcattattctctctttgggctgctggatgggaagcaacacca
caacagtcttacgggttctttcgtattgagattcttggtgcattggtctccattcagctc
atatggctgcttgctggcatactcgtatatgaggctattgtaaggctcattaatgagagc
ggtgaggtgcagggctccctcatgtttgctgtatcagcttttggattgtttgtcaacatc
ataatggctgtactgctagggcatgatcatggacacggccatggccatggccatggacat
tcgcatgatcatagccatggtgattcagatgatgaccattcacaccatgaagaacaagaa
cagggccatgtgcatcgccacgagcacagccatggaagttctattactgtcacaacccat
caccaccaccacccaagcactggacaacatcatgatgctgaggaaccattgcttaagcat
gaagccagctgtgagggcacccaatctgctgccaaaccagctaagaaacctcgccgcaat
atcaatgtacacagtgcttatcttcatgtgcttggagattcaatccagagcatcggggta
atgataggtggggctatcatctggtacaagcctgagtggaagatcatcgatctcatctgc
accctcatcttctctgtggttgtactgtttaccacaatcaggatgctgcgcaacatactt
gaagtactgatggagagcactccccgtgagattgatgccaccaggctcgagatggggctc
tgcgagatggatggtgtggttgctgtccacgagcttcatatctgggccatcacagtaggg
aaggtgctcctagcatgccatgtgacaatagcaagggaagccgatgccgatcagatcctt
gacaaggtgatcggatacatcaagacagagtacaacatcagccatgtgaccattcagatt
gagcgtgagtag
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integrated database retrieval system
