Panicum virgatum (switchgrass): 120664154
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Entry
120664154 CDS
T07260
Name
(RefSeq) RNA polymerase II-associated protein 3-like isoform X1
KO
K23002
RNA polymerase II-associated protein 3
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pvir03021
]
120664154
Transcription machinery [BR:
pvir03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
120664154
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RPAP3_C
TPR_1
TPR_2
TPR_8
TPR_BSK1_C
TPR_11
TPR_12
TPR_16
TPR_14
TPR_10
TPR_9
Coatomer_E
ANAPC3
DUF7547
HAGH_C
Motif
Other DBs
NCBI-GeneID:
120664154
NCBI-ProteinID:
XP_039799120
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All DBs
Position
3N:complement(8587420..8591743)
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AA seq
397 aa
AA seq
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MARSNGTSGTSAASFGGLYNKKYSSYLNDEPMPDAASEKEQGNEYFKQKKFAEAIECYSR
SIGLSPTAVAYANRAMAYLKLRRFKEAEDDCTEALNLDDRYIKAYSRRITARKELGKLKE
AMDDAEFAISLEPNNPELRKQYSDIKALHMEVKKKLAKTTQVPAKRAVSGFDKPADKKEI
TSHPPTISQKDSFMEVDSPIRAAVDIRESAGGRSKGGSGVIINENGMQQSWDANQKPGPE
ASIQELASRAASRYMASTVKSVKIPKTAYDFEVSWRALSDDTAQQIQLLKSIPPASLPEI
FKNALSAPFLIDIVKCSASIFRDDAALAVSILENLAKVPRFDLIIMCLSSMHKSELRKIW
DQVFFAEKASADQVEALRQLRGKYIQGGWQDNMFTSS
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggcgagatcaaatgggacttcgggaacttccgctgcaagttttggcggtctgtacaat
aagaagtattcaagctacttaaatgatgaaccaatgcctgatgccgcatcagaaaaggag
cagggaaatgaatatttcaaacagaagaagtttgctgaagcaattgagtgctactccaga
agtattgggttgtctcctacagcagttgcttatgcaaatagagctatggcatatcttaaa
ctaagaagattcaaggaggcagaggacgattgcactgaagctttgaatctggatgatcga
tatattaaagcatactcacggcgaattacagcacggaaagaacttgggaagcttaaggaa
gcaatggatgatgctgaatttgccatcagtcttgagccaaacaatccagagctaaggaag
cagtattctgacataaaagctttgcacatggaggtgaagaaaaaattggctaaaacaacc
caggtgccagctaagcgtgcagtttctggatttgataaacctgctgataaaaaggaaatc
acttctcatccgccgactatctcccagaaggacagtttcatggaagttgattcacctatt
agagctgcagtggatatcagagagagtgctggtggcaggtctaaaggagggtctggagta
atcatcaatgagaatggcatgcagcagtcttgggatgccaatcagaagcctgggccagaa
gcttcaattcaagagcttgcatcgcgagctgcttcacggtatatggccagcactgtaaaa
agcgtcaagataccaaagacagcttatgactttgaggtttcttggagagctctttctgat
gacactgctcagcaaatacagttgttaaagtcaattccacctgcaagcctaccagagatt
ttcaagaacgcactttctgctccttttctcattgacatagtgaagtgttcagcctcaatt
tttcgggatgatgcagcgttagctgttagcattttggagaatttggcaaaagttccacgc
tttgacttgataatcatgtgcctttcatccatgcacaaatctgaactgaggaagatatgg
gatcaagtattctttgctgaaaaagcatcagctgatcaggtggaagctcttaggcagctg
cgaggcaaatatattcagggagggtggcaggataacatgttcacttcaagctaa
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