Panicum virgatum (switchgrass): 120664193
Help
Entry
120664193 CDS
T07260
Name
(RefSeq) aspartic proteinase isoform X1
KO
K08245
phytepsin [EC:
3.4.23.40
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pvir01002
]
120664193
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.23 Aspartic endopeptidases
3.4.23.40 phytepsin
120664193
Peptidases and inhibitors [BR:
pvir01002
]
Aspartic peptidases
Family A1: pepsin family
120664193
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Asp
TAXi_N
SapB_1
SapB_2
TAXi_C
Saposin
DHQ_synthase
Zn_finger_prot
Motif
Other DBs
NCBI-GeneID:
120664193
NCBI-ProteinID:
XP_039799192
LinkDB
All DBs
Position
3N:8960362..8964525
Genome browser
AA seq
505 aa
AA seq
DB search
MECSWFSGMMRRRQLLLATACLWALSCASLLRASTPDGLLRVSLNKNKLDREALAAAKVG
RQHDSRRLRAAGGDEVPLIDYLNTQYFGVIGIGTPPQNFTVIFDTGSSNLWIPSSKCYFS
IACYFHHKYKSSKSSTYKSDGETCKITYGSGSISGFFSKDNVLVGDLVVKSQKFIETTRE
PSFSFILGKFDGILGLGYPEISVGKAPPIWQSMEEQKLLKDNVFSFWLNRNPDASSGGEL
VFGGVDPKHFKGNHTYVPVSRKGYWQFNMGDLLIDGHSTGFCAKGCAAIADSGTSLLAGP
TAIVAQVNHAIGAEGIISTECKEVVSQYGEMILNLLIAQTDPQKVCSQIGLCMFDGIQSV
SEGIESVVGKENLGSDVMCTACQMAVVWIENQLRENKTKEIILQYANQLCERLPSPNGES
TVSCHQISKMPNLSFTIANKSFTLTPEQYIVKLEQGGQTVCISGFMAFDIPPPRGPLWIL
GDVFMGAYHTVFDFGKDRIGFAESA
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggagtgctcttggttctctgggatgatgaggcgcaggcagctcttgctggcgaccgcc
tgcttgtgggctctgtcgtgcgcctcgctgctccgtgcttccacccctgacgggcttctc
agggtcagcctgaacaagaacaagctcgaccgcgaggcgctggccgcggccaaggttggc
aggcagcacgacagccgccgcctgagggctgccggcggcgacgaggtccctctcatcgac
tacctcaacacccagtacttcggggtcatcggcatcggcacgccgccgcagaacttcacc
gtcatcttcgacactgggagctccaacctctggatcccctcctccaaatgttatttctcg
atagcatgctacttccaccacaaatacaagtccagcaagtctagcacttacaagtctgat
ggggagacttgcaaaattacttatggctctggatcaatttccggattcttcagcaaggat
aacgtgcttgttggagaccttgttgttaaaagccagaagttcattgagactactcgcgaa
cccagtttctcattcatccttgggaagtttgatggcattcttggtcttggataccctgaa
atctctgtcggcaaagctcctcccatttggcagagcatggaagagcagaaacttcttaag
gacaacgtcttctctttctggctcaaccgaaaccctgatgcatcttccggtggcgagctt
gtctttggcggcgtggaccctaaacacttcaaggggaaccacacctatgttcctgtttcc
cgcaaaggttactggcagttcaacatgggggatctcctcattgatggtcactcaactggt
ttctgtgcaaaaggctgtgctgctattgccgactctgggacttctttgttggctggtcct
acagctatagttgctcaagtgaaccatgcaattggggcagagggaattatcagcacggaa
tgcaaagaagtggtgagccagtatggagagatgatcctcaacttgctcatagcacagaca
gatccacagaaagtttgcagccagattggtctgtgcatgtttgatggtattcagtctgtc
agtgaaggaattgaatctgttgtcgggaaagaaaacctgggctcagatgttatgtgcaca
gcctgtcagatggctgttgtgtggatagagaatcagctccgtgaaaacaaaacaaaggag
ataatattgcaatatgctaaccagctatgtgagcgtctaccaagtcccaatggcgaatca
acagtcagctgccatcagatatcaaagatgccaaatctttcattcactattgcaaacaag
agcttcaccctaacaccagagcagtacattgtgaagctggagcaaggagggcaaactgtc
tgcatcagtgggttcatggcattcgacataccacccccgcgtggtcctctctggattctt
ggggatgtcttcatgggagcttaccacacagtgttcgactttggcaaggacaggatcggc
ttcgcggaatctgcatga
DBGET
integrated database retrieval system
