Panicum virgatum (switchgrass): 120664267
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Entry
120664267 CDS
T07260
Name
(RefSeq) phospholipase D alpha 1-like
KO
K01115
phospholipase D1/2 [EC:
3.1.4.4
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00564
Glycerophospholipid metabolism
pvir00565
Ether lipid metabolism
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
120664267
00565 Ether lipid metabolism
120664267
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120664267
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120664267
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.4 phospholipase D
120664267
Membrane trafficking [BR:
pvir04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
120664267
Endosome - Golgi transport
Others
Others
120664267
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PLD_C
PLDc
PLDc_2
C2
Motif
Other DBs
NCBI-GeneID:
120664267
NCBI-ProteinID:
XP_039799335
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All DBs
Position
3N:complement(11481114..11484601)
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AA seq
864 aa
AA seq
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MPAWAWPAPRPLLKPIGEVTSPDLLPAPQPVFSASTGATMAKILLHGSLHVTIFEAEEIS
NSSRPSSQAPGFLRKGIELLDHQLVEGIEDTVGVGKGTSKIYATIGLDKARVGRTRTLTD
ETASPRWYESFHVYCAHLASDVVFTIRAKNPIGASTVGVGYLPVRDIFGGQELDRWLPLC
DDDDKDRRPLEGGARVHVKLQYFDISKDHSWGRGVRSGRYPGVPYTFFSQRQGCRVTLYQ
DAHVPDGFVPRIPLDGGRCYEPHRCWEDIFDAISGARHLIYITGWSVYTEITLVRDGGRP
KPGGGVTLGELLKKKAGEGVRVLMLVWDDRTSVGVLKKDGLMATHDEETMNYFQGTDVHC
VLCPRNPDDSGSIVQDLQISTMFTHHQKIVVVDHDMPAGRRSKRRIVSFVGGLDLCDGRY
DTPVHSLFRTLDTAHHDDFHQPNFATAAIAKGGPREPWHDIHCRLEGPVAWDVLYNFEQR
WRKQGGKDLLIQLRDLADEIIPPSPVTFPEDGEAWSVQLFRSIDGGAAFGFPDTPDDATR
AGLVSGKDQIIDRSIQDAYIHAIRRARSFIYIENQYFLGSSYCWRPDGIRPEDIGAAHLI
PKELSMKVVSKIEAGERFAVYVVMPMWPEGIPESGSVQAILDWQRRTMEMMYTDIAQAIQ
AKGIDANPRDYLTFFCLGNREAKRPGEYVPTEEAEPDTDYIRAQQNRRFMIYVHTKMMIV
DDEYIIVGSANINQRSMDGARDSEIAMGAYQPHHLAAASRPARGQVHGFRMSLWYEHLGA
VDDAFTRPDSLECVRKVNAMGDRYWDLYAGDGPERDLPGHLLTYPVGVAADGAVTQLPGT
EFFPDTQARVLGAKSDYLPPILTT
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgccggcatgggcatggccggctccccgtcctctccttaaacccatcggcgaggtcact
agccccgatttgcttcctgctcctcaacctgtcttcagcgcgtcgaccggagcgacgatg
gcgaagatcctgctccatggctcgcttcatgtcaccatcttcgaggccgaggagatctcc
aactccagccgacccagcagccaggcgcccggcttcctccgcaagggaattgaactactc
gatcatcagctggtggaggggatcgaggacacggtgggcgtgggcaagggcaccagcaag
atctacgccaccatcggcctggacaaggcccgcgtggggcgcacccgcacgctcaccgac
gagacggccagcccgcgctggtacgagtccttccacgtctactgcgcgcacctcgcctcc
gacgtcgtcttcaccatccgggccaagaaccccatcggagcctccaccgtcggcgtcggc
tacctccccgtccgcgacatcttcggcggccaggagctcgaccgctggctgccgctctgc
gacgacgacgacaaggaccgcaggccgctcgagggcggcgccagggtccacgtcaagctc
cagtacttcgacatctccaaggaccacagctggggccgcggcgtccgcagcggcaggtac
cccggcgtgccctacaccttcttctcgcagcgccaggggtgcagggtcacgctgtaccag
gacgcgcacgtccccgacggcttcgtcccgaggatcccgctcgacggcggccggtgctac
gagccgcaccgctgttgggaggacatcttcgacgccatcagcggcgccaggcacctcatc
tacatcaccggctggtcggtctacaccgagatcacgctggtcagggacggcggccggccc
aagcccggcggcggcgtcacgctcggcgagctgctcaagaaaaaggccggcgagggcgtc
cgggtgctgatgctggtctgggacgaccgcacctccgtcggggtgctaaaaaaggacggc
ctcatggccacgcacgacgaggagaccatgaactacttccagggcaccgacgtgcactgc
gtgctgtgcccccggaaccccgacgactccgggagcatcgtgcaggacctgcagatctcc
accatgttcacgcaccaccagaagatcgtcgtcgtcgaccacgacatgccggcgggccgg
cggagtaagcggaggatcgtcagcttcgtgggcgggctggacctctgcgacggccgctac
gacacgccggtgcactcgctgttccggacgctggacacggcgcaccacgacgacttccac
cagcccaacttcgcgacggccgccatcgccaagggcgggccccgggagccctggcacgac
atccactgccgcctcgagggccccgtggcctgggacgtgctctacaacttcgagcagcgg
tggcgcaagcagggcggcaaggacctcctcatccagctccgggacctcgccgacgagatc
atcccgccgtcgcccgtcacgttcccggaggacggcgaggcctggagcgtgcagctgttc
cggtccatcgacggcggcgccgccttcgggttccccgacacccccgacgacgccaccagg
gccgggctcgtcagcggcaaggaccagatcatcgaccggagcatccaggacgcctacatc
cacgccatccgccgcgcccggagcttcatctacatcgagaaccagtacttcctgggcagc
tcctactgctggaggcccgacggcatcaggcccgaggacatcggcgcggcgcacctcatc
cccaaggagctgtccatgaaggtggtgagcaagatcgaggccggcgagcgcttcgccgtg
tacgtcgtcatgcccatgtggccggagggcatcccggagagcggctccgtgcaggccatc
ctggactggcagaggaggaccatggagatgatgtacaccgacatcgcgcaggcgatccag
gccaaggggatcgacgccaaccccagggactacctcaccttcttctgcctcggcaaccgg
gaggccaagaggcccggcgagtacgtgcccacggaggaggcggagcccgacaccgactac
atccgggcccaacagaacaggaggttcatgatctacgtccacaccaagatgatgatcgtg
gatgacgagtacatcatcgtggggtcggccaacatcaaccagaggtccatggacggcgcg
cgggactcggagatcgccatgggcgcctaccagccgcaccacctggcggcggcgagccgg
ccggcgagggggcaggtgcacggcttccggatgtctctgtggtacgagcacctgggcgcg
gtggacgacgccttcacccggccggacagcctcgagtgcgtgcgcaaggtgaacgccatg
ggcgacaggtactgggacctgtacgccggcgacgggcccgagcgcgacctgccggggcac
ctgctcacgtaccccgtcggggtcgccgccgacggcgccgtcacgcagctgccggggacg
gagttcttcccggacacccaggcgcgggtgctcggcgccaagtccgactacctcccgccc
atcctcaccacataa
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