Panicum virgatum (switchgrass): 120664364
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Entry
120664364 CDS
T07260
Name
(RefSeq) photosynthetic NDH subunit of lumenal location 5, chloroplastic-like
KO
K03768
peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:
5.2.1.8
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120664364
Enzymes [BR:
pvir01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
120664364
Chaperones and folding catalysts [BR:
pvir03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
120664364
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Motif
Other DBs
NCBI-GeneID:
120664364
NCBI-ProteinID:
XP_039799482
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All DBs
Position
3N:complement(12749842..12752649)
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AA seq
252 aa
AA seq
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MAAAATSLATTLAIARPAAAASGKRALLASKASSPLLSFSSARLPSQAVSFSGGLAPSPS
HSRARFVTSASAEPKEADIQSKITNKVYFDISIGNPVGKNVGRIVIGLYGDDVPQTAENF
RALCTGEKGFGYKGSSFHRVIRDFMIQGGDFDKGNGTGGKSIYGRTFKDENFKLVHTGPG
AVSMANAGPNTNGSQFFICTVKTPWLDGRHVVFGQVLEGMDVVKLIESQETDRGDRPKKK
VVISDCGELPVV
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atggcggctgctgctacctccctcgctactaccctcgccatcgcgcgaccggcggcggcg
gcatccgggaagcgggccctcctcgcctccaaggcctcctcgccgctcctatccttcagc
agtgcccgcctcccctcacaggccgtttccttctccgggggcctagcgccttcgccctcc
cacagccgcgcgcgcttcgtcacatccgccagcgccgaacccaaggaagcagatattcag
tcaaaaatcacaaacaaggtgtactttgacataagcatcgggaatcctgtggggaagaat
gttgggaggattgtcatcggcttgtatggagatgatgttccccaaacagcagagaacttc
cgtgctctttgcactggagagaaagggttcggatacaagggatccagtttccaccgtgtc
atcagggatttcatgattcaggggggagattttgacaagggcaatggtactggcgggaaa
agcatatatggacgaaccttcaaagatgagaacttcaaattggttcacactggacctgga
gcggttagtatggctaatgctggaccaaacaccaatggcagccagtttttcatctgcact
gtcaagacaccttggttggacgggaggcacgtcgtgtttggccaggttctagaaggcatg
gatgtcgtgaagctgatcgaatcgcaggagactgacagaggtgaccgtccgaagaagaaa
gtagtcatcagcgattgcggggagcttccggtggtctaa
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