Panicum virgatum (switchgrass): 120664369
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Entry
120664369 CDS
T07260
Name
(RefSeq) E3 ubiquitin-protein ligase ORTHRUS 2-like
KO
K10638
E3 ubiquitin-protein ligase UHRF1 [EC:
2.3.2.27
]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pvir04121
]
120664369
03036 Chromosome and associated proteins [BR:
pvir03036
]
120664369
Enzymes [BR:
pvir01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120664369
Ubiquitin system [BR:
pvir04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120664369
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
120664369
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAD_SRA
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
PHD
Prok-RING_1
zf-RING_10
zf-RING_5
Prok-RING_4
zf-RING_4
TRAF3_RING
RING_XB3-XBAT31
zf-RING_6
zf-RING_14
Motif
Other DBs
NCBI-GeneID:
120664369
NCBI-ProteinID:
XP_039799491
LinkDB
All DBs
Position
3N:complement(12826792..12831305)
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AA seq
761 aa
AA seq
DB search
MPDLPCDGDGVCMVCRVASPPEVDLLRCSTCATPWHSPCLSKPPALADAASWSCPDCSPD
SSPAPAPAGPGNDLVAAIRAIEADHTLSDQEKARRRQALLAGSAPAAADDDEDDNAADDA
LEIVGKNFSCVFCMKLPERPVTTPCGHNFCLKCFQKWIQNGKRTCGKCRAQIPAKMAEQP
RINSALVEVIRMAKISKNPNSSGSTAPYHYIRNDDRPDKAFTTDRAKKAGKANASSGQIF
VTIAPDHFGPILAENDPRRNIGVRVGETWEDRLECRQWGAHFPHVAGIAGQSTYGAQSVA
LSGGYEDDEDHGEWFLYTGSGGRDLSGNKRTNKEQSSDQKFEKLNAALRISCLRGYPVRV
VRSHKEKRSSYAPESGVRYDGVYRIEKCWRKIGIQGTFKVCRYLFVRCDNEPAPWTSDDH
GDRPRPLPKIKELQGATDITERKGRPSWDYVEKEGWKWVVPPPISKKPVLSGDPDTDKQI
RRATKRAHMSVAERLLKEFGCSICRAVIKEPLTTPCAHNFCKACLLGAYDSQASMRERSR
GGRTLRAQKIVKKCPSCPTDICDFLENPQINREMMELIESLQRKADEGDTKVASDDAEEC
GDGESEGNDGALVKEEDDSSMNEDEQDSADADANADGSVKIVVEIEEGKDDKKAKMGVTE
VADVLVEEKAVKETKKRKGDAETGTDVAPAKRMKKNIAAVEEATCTPVKRISKSGDVDSE
GNSSPVVSSGRRVTRSSANASEADDSLARRTRSRARADAGC
NT seq
2286 nt
NT seq
+upstream
nt +downstream
nt
atgccggacctcccctgcgacggcgatggtgtctgcatggtctgccgcgtcgcctccccg
cccgaggtcgatctgctccgctgctccacctgcgccaccccgtggcactccccgtgcctc
tccaagccccccgccctcgccgacgccgccagctggagctgccccgactgctcccccgac
tcctccccggccccggctcccgccggccccgggaacgacctcgtcgccgccatccgcgcc
atcgaggccgaccacaccctctccgaccaggagaaagcgcggcgccgccaggccctcctc
gccggctccgcccccgcggccgccgatgacgacgaggacgacaacgcggcggacgacgcc
ctcgagatcgtggggaagaacttcagctgcgtcttctgtatgaagcttcctgaacgtccc
gttacgacaccttgtggccataacttctgcttgaaatgcttccagaagtggattcagaat
gggaaaaggacgtgtgggaaatgtcgggcgcagatcccggccaaaatggctgagcaacca
agaattaactctgcactagttgaagttatccggatggctaagatttcaaagaatcccaac
tcatcaggctctacagctccatatcactatattcggaatgatgataggcctgacaaggca
tttacaactgacagagctaagaaggctgggaaagctaacgcttctagtggccagatcttt
gtgaccattgcacctgatcattttggccccattcttgcagaaaatgatccccgaaggaat
attggtgttcgagttggggaaacatgggaagaccgtcttgagtgcaggcaatggggtgcc
cattttcctcatgtagctggtattgctggccagtctacatatggcgcacaatcagtagcc
ctctcaggagggtatgaagatgatgaagaccatggagagtggtttctttacactggaagt
ggtggaagggatctaagcgggaacaagcggacaaacaaggagcaatcatcagatcagaaa
ttcgagaagctaaatgctgctttacgtattagttgcttgaggggctaccctgtcagggtt
gtgcggtcgcacaaagagaagcgttcctcatatgctcctgaatctggtgtgaggtatgat
ggagtttatagaattgagaaatgttggaggaagattggtattcagggtacgttcaaggtc
tgcaggtatctctttgtacgctgtgacaatgaacctgccccctggaccagtgatgatcat
ggtgaccgtccaaggccattgccgaagataaaagagctgcaaggtgcaactgatataacg
gagaggaaaggacgcccttcatgggactatgttgagaaagaaggctggaaatgggtggtg
cctccaccaatcagcaagaagcctgttctctctggggatcctgacactgacaaacaaatc
cggagagcaacaaagcgtgctcatatgtctgttgctgagaggctactgaaagagtttggc
tgttccatctgccgggccgtgattaaagaaccccttactactccatgtgctcacaacttt
tgcaaggcttgtttgcttggggcatatgatagccaggcttctatgagggaaagaagccgt
ggtggtcgaacccttagggcacagaagattgtgaagaaatgcccttcctgcccaactgac
atctgtgacttcctagaaaatccccagatcaaccgagaaatgatggagctgattgagtct
ttgcaacgcaaggctgatgaaggtgacaccaaggtggcttcagatgatgctgaggagtgt
ggtgatggcgagtcagagggaaatgatggtgctttggtgaaggaagaggatgatagcagc
atgaatgaggatgagcaagacagtgctgatgctgatgctaatgctgatggctctgtgaaa
attgtggttgaaatcgaggaaggaaaagatgataagaaggccaagatgggtgtgactgaa
gtggcggatgtgttagttgaagaaaaggctgtgaaagagacaaagaaacgcaagggcgat
gctgagactggcacagatgttgctcctgctaaaaggatgaagaaaaacattgctgctgtg
gaagaggctacttgcactccagtgaaacggatcagtaagagtggtgatgtggatagtgaa
ggcaatagtagtccggttgtgagcagtggccgtcgggtgactcggagcagtgcgaatgct
agtgaagctgatgatagtctggcaaggaggaccagaagccgtgctagagctgatgctggt
tgctga
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