Panicum virgatum (switchgrass): 120664401
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Entry
120664401 CDS
T07260
Name
(RefSeq) 26S proteasome regulatory subunit RPN13-like isoform X1
KO
K06691
26S proteasome regulatory subunit N13
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
120664401
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
pvir03051
]
120664401
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
120664401
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rpn13_ADRM1_Pru
RPN13_C
Motif
Other DBs
NCBI-GeneID:
120664401
NCBI-ProteinID:
XP_039799544
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Position
3N:13147913..13152678
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AA seq
314 aa
AA seq
DB search
MESPEPLQDVMCEFRAGKMSLEGTRVVPDTRKGLVRVGRGEEGLVHFQWLDRGQNIVEDD
QIVFPDEAIFEKVTESSGRVYILKFKHDNRKFFFWMQEPNADGDSQICIQVNAYLNRPLD
AEADLAVPIEAEMSEDTADDDISSRAGNLVDQSMTSDLAGEVTSAAGPVRLEDLQRILSA
IQPSGVSGAAADPDAGVGLGDILKPELILPLIENLPIEQLASHLPEGSWTPADILELLQS
PPLRQQLDAFTHVLRTGQIDLAQFGVDPNKYKFTVVSFLEALEDSVDKAGSSSSAGDKDA
EPKQGGGNDPMDES
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atggagagccctgagcctctacaggatgtcatgtgtgagtttcgtgctggtaagatgtct
cttgagggaacacgagtggttcctgacacacgcaaggggcttgtccgtgttggtaggggt
gaagaaggcttagtccactttcagtggcttgatcgtggacagaacatagttgaagatgac
caaattgtctttcctgatgaggccatcttcgagaaggtaacagaatcgtctggaagggtt
tacatcttgaagttcaagcatgacaacagaaaattcttcttctggatgcaggaaccaaat
gctgatggggattctcagatttgcatccaagttaatgcctacttaaatcggccattagat
gctgaggcggatcttgcagtgcctatcgaagcagaaatgtctgaagatacagctgatgat
gatatctcttcgagagctgggaatttagttgatcagagcatgacttctgatttggctggt
gaagtgacatctgctgctggacctgtacgcttggaggacctgcaacgaatactgagtgca
atacagccatcaggtgtatcaggtgctgcagctgaccctgatgctggagtaggactagga
gacatcttgaagcctgaattgatcttgccattaattgagaacctgcccattgaacaattg
gcatcacatcttccggagggctcatggactcctgctgatatccttgagcttctccaaagt
cctcctttgcgtcagcaattagatgcattcacccatgtgctacggactgggcaaatagat
cttgcccaatttggagttgacccgaataaatataagttcacagtggtctcattcctggag
gctctggaagactcggttgacaaagcaggatcctcctcttcggctggggacaaggatgca
gagcccaagcaaggcggtggaaacgatcccatggacgagagttga
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