Panicum virgatum (switchgrass): 120664443
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Entry
120664443 CDS
T07260
Name
(RefSeq) hydroxyproline O-arabinosyltransferase PLENTY-like isoform X1
KO
K20782
hydroxyproline O-arabinosyltransferase [EC:
2.4.2.58
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00514
Other types of O-glycan biosynthesis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
120664443
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120664443
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.58 hydroxyproline O-arabinosyltransferase
120664443
Glycosyltransferases [BR:
pvir01003
]
O-Glycan biosynthesis
O-linked Ara type
120664443
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPAT
Motif
Other DBs
NCBI-GeneID:
120664443
NCBI-ProteinID:
XP_039799619
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All DBs
Position
3N:complement(13568745..13572611)
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AA seq
377 aa
AA seq
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MSGRKNAGSTSPWMLILISLVCFFATYNFLTMPSRGWDGPRKFLGGGGGDRDSAVSYRSG
SGSGPNKRFHVALTATDALYSQWQSRIMHYWYKEMRDRPGSDMGGFTRILHSGKPDGLMD
EIPTMVVDPLPEGKDKGYIVLNRPWAFVQWLQKAKIDEDYILMAEPDHIFVKPLPNLAHG
DEPAAFPFFYIKPTENEKILRKFFPEEKGPVSKIDPIGNSPVIIKKAQLEKIATTWMNVS
LQMKEDQETDKAFGWVLEMYAYAVASALHGVHHSLRKDFMIQPPWDLKSDNTFIIHYTYG
CDYSMKGELTYGKIGEWRFDKRSYLQSPPPRNLSLPPPGVPESVSCAISTGNPHGNGHLR
KLKWHRKFNANSWEHLC
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggaggaagaatgccggaagcacctccccctggatgctcatcctcatctcccta
gtatgcttcttcgcgacctacaacttcctgacgatgcccagccggggttgggacgggccg
cgcaagttcctcggcgggggcggcggggatcgggactcggctgtctcgtacaggtcgggc
tctggttcgggccccaataagcggttccacgtcgcgctgacggcgacggatgcgctttac
agccagtggcagtcccggataatgcactattggtacaaggagatgagggaccggcctggg
tccgatatgggcggcttcacaaggatccttcactcggggaagcctgatggattgatggat
gagatacccaccatggtggttgacccgcttcctgaaggcaaggataagggatacattgtc
ttaaataggccttgggcgtttgtccagtggctgcagaaagcaaagatcgacgaagactat
atactaatggcggagccagatcatatctttgtgaagcctttgccaaacttagcccatggt
gatgaaccagcggcttttccatttttctacatcaaaccaaccgagaacgagaagatattg
aggaagttctttccagaagaaaaaggacctgtctcaaaaatcgatcccattggcaactct
ccggttataatcaagaaggctcaacttgagaagattgcaacaacctggatgaatgtttca
ctacaaatgaaagaggatcaggagacagacaaagcattcggatgggtcttggaaatgtat
gcatatgctgttgctagtgcactgcacggtgtgcaccatagtctccgtaaagattttatg
attcagcctccttgggacctgaaatcagacaacacattcatcatccattacacatatgga
tgcgattattcgatgaagggtgagctaacttatgggaaaattggtgagtggcgttttgac
aaaagatcttaccttcaatcaccaccaccaagaaatctttcactaccccctccaggagtt
cctgaaagtgtgagctgtgccatttctactggcaatccacacggcaatggacacttgagg
aagctcaaatggcatcgcaagttcaatgcaaattcctgggagcatttatgttga
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