Panicum virgatum (switchgrass): 120664526
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Entry
120664526 CDS
T07260
Name
(RefSeq) putative DNA-3-methyladenine glycosylase YfjP
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120664526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120664526
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
120664526
DNA repair and recombination proteins [BR:
pvir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120664526
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
120664526
NCBI-ProteinID:
XP_039799728
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All DBs
Position
3N:complement(14689393..14692331)
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AA seq
357 aa
AA seq
DB search
MGEQSLSQPKPQPLSPSPPASTASPAPAPAPAAAASTSTSSSPAIAAASRPKKAAHRPSD
SNPPKKPRLTFAIPGRPLSAAGEVGVAIRHLRDADPVLAAVIDAHDAPVFQCPHRPFHSL
VRSILYQQLAFKAAASVYSRFLSLLGGEASVTPDAVLALTPQQLRQIGVSPRKASYLHDL
ARKYVSGILSDSAIINMDDRSLAAMLTMVKGIGAWSVHMFMIFSLARPDVLPSADLGVRK
GVQMLYELEDVPRPSQMDKLCERWRPYRSVGAWYMWRLIESKVPQPAPAIPVGPLALPSP
DGQIMLHEQHQQQQQQQQQNVIQMIDPLQMLPGMGIIGVVGSIRDLITRRPKLLISD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgggcgagcaatccctctcccagcccaagccccagcccctctccccgtcgccccccgcc
tccaccgcgtcgcccgcccccgcccccgcccccgccgccgccgcgtccacctccacctcc
agctcccccgccatcgccgccgcctcgcgccccaagaaggcggcccaccgaccatccgac
tccaacccgccgaagaagccccgcctgacgtttgcgatcccgggccggcccctttccgcc
gccggcgaggtgggcgtggccatccgtcacctgcgcgacgccgaccccgtcctcgccgcc
gtcatcgacgcccacgatgcccccgtgttccagtgcccgcaccgcccgttccactccctc
gtccgatccatcctctaccagcagctcgccttcaaggccgccgcctctgtctactcccgg
ttcctctcgctcctcggcggcgaggccagcgtgacccccgacgccgtcctcgcgctcacc
ccgcagcagctccgccagatcggggtctccccgcgcaaggcgtcctacctccacgacctc
gcccgcaagtatgtctcggggatcctctccgattccgccatcatcaacatggacgaccgc
tccctcgccgccatgctcaccatggtcaagggcatcggcgcctggagcgtccacatgttc
atgatcttctccctcgcgcgccccgatgtgctcccctccgctgaccttggcgtgcgcaag
ggcgtgcagatgctctacgagctcgaagacgtgcctcggccctcgcagatggacaagctc
tgcgagcggtggcgcccctaccgctccgtcggggcgtggtatatgtggcggctcattgag
tccaaggtgccgcagccggcgccggccatccctgtaggaccacttgccctcccttcgcct
gatggccagattatgctacatgagcagcatcagcagcagcagcagcagcagcagcagaac
gtcatccaaatgatcgatccccttcagatgctcccaggaatgggtatcatcggtgttgtg
gggagcatcagagatctgattacgcgtcgccccaagctcctgatttctgattaa
DBGET
integrated database retrieval system
