Panicum virgatum (switchgrass): 120664591
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Entry
120664591 CDS
T07260
Name
(RefSeq) protein timeless homolog isoform X1
KO
K10997
replication fork protection complex subunit TIMELESS/Tof1/Swi1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120664591
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120664591
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Fork protection complex
120664591
DNA repair and recombination proteins [BR:
pvir03400
]
Eukaryotic type
Check point factors
FPC (fork protection complex)
120664591
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TIMELESS
HeLo
Motif
Other DBs
NCBI-GeneID:
120664591
NCBI-ProteinID:
XP_039799802
LinkDB
All DBs
Position
3N:15446517..15458158
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AA seq
1247 aa
AA seq
DB search
MDSAVLSLTCAGLGAAEEDDDGAVIGYAKSDHCLDNLKDLQRFLRRDDPQRREVFKQVCK
WKIASRDLVPIIENYQTDRNLVITAVKVLVFLTMPVEPSSEDVAQQIEYLWDLKAALTRN
VAVTVIVSLLEDPLDRLERTLFTEDDWKLVQLVLTLFRNILAIQEITLPQKASGEATHLL
FLADSFLELMFQENVMDLILVLTQHMDEPSGYLKEENLLLMEIYHYLFLGRDPGLIARAS
NKGSKEQVNADIDSSVDSLKLMMEEEERKKRMFRQRNLEHNSLSGTFTCFSVDGSKSLCK
GNPSSTPANSLLKIRNVQKGPQKRIAWDNELLYIPKEGITEMLRSFLDQFLSGAYNILMQ
SVCDDIKSEHHSIEKSDISTFFKVSRFVLAFQHEKASNDQKSVKEIQPSEVSPSNGHDDN
LPFHGDICGPVAATLNEDMFNIVISRWREAYESLKETNDYNTLSAAGSLMKTMIDMIYLV
LKVLPEDSRESQTARVLLYKLFYDQTEQGLTQFLLNLFRSFDSHKQPKSDLADLLETIHI
MLQLMEKLQARGALRVAKRTKKGRKKKVRNDKNENSEPKAENVEPNCADPTDGTKCPPES
VPDLRTVDPAVEPSPQEQGEVNASGARVPETLVNTAVNMEGTANAEGDPSCTEGIMKTNL
IDEEGEASDSSIDDHQPATSEVDFNVSRLISSLANNSVVQNVCWLLKHYKSNSYRTNHYI
ICMLRRFCEDLELSPMLYQLSLLTTFYDILAEQKLSSSKEYTNIVNFLSKVVRKMLRAMR
KQPLLFVDILFWKTRKECHCIDADALLNELKKDAGNKNGEIGSSKGWRGPINIADSLGDD
EADLVIPQAPYDADKDGDLSAGEHEDDFQKSSTTFKRSRLMSFPDSEPEENERNHVSRGS
LSSEVPKRRGRSIFTEEQERLIKDLYGKYKDERKCSHLIAEALDPTGKISSAQISRKLTQ
LGLRNAMWRKKVADGSLSNIDLATEPQNDSLDEHNHDPKPKSSRTSRKRLHGSNRGHDDT
SHGRSSDEETLQVLKSRAKNKKLPLVDSSLSTSQHQEAQHDPDSDDATIGSMIRSGKKKR
LSTSEFEGNVQNHKESSNNTNAKDSSPRASQHKETLQDNYPDDEGIGSMLRSGKKKRLVN
SNFSANMQEGQEPLTNIELHDEAIASNIMDASPIHGPDAVNNSGNTREAELLDDFEVELD
NHENTDQRITDDVNITGSGDATNSEANQRGGLKRRHRSVIDDDDDDE
NT seq
3744 nt
NT seq
+upstream
nt +downstream
nt
atggattcggcggtgctctcactcacctgcgcgggcctcggcgccgcggaggaggatgac
gacggcgccgtcatcggctacgccaagagcgaccactgcctagataatctgaaggatcta
cagcgattccttcggcgggacgacccgcagcggcgggaggttttcaagcaggtctgcaag
tggaagattgcgtcgagagatctggtgcccatcattgagaattaccagaccgaccgcaat
ctggtgatcactgcggtgaaagtactggtgttccttacaatgccagtggagccctcgtca
gaggatgttgcacagcagatagagtatctgtgggatttgaaggctgcactgacacgcaat
gttgcggtgacagtcattgtgtctcttcttgaggacccattggatcgtttggaaagaact
ttattcacagaagatgactggaagttagttcagttggtacttactttgttccgcaacatc
ttggctattcaagaaatcacattgcctcagaaggcatctggagaagctacccacttactg
ttcctggctgacagctttttggagctaatgttccaagagaatgtgatggacctaatctta
gtgctaactcagcatatggatgagccctctggttatcttaaggaggaaaaccttcttttg
atggagatctatcattatctcttcttaggccgagatccaggattgattgcccgagcttca
aataaaggttcaaaggagcaggttaacgcagatattgattcttcagttgattcactgaaa
ttgatgatggaggaagaggaaaggaaaaaaagaatgttcaggcaacgcaacttagaacat
aactcactcagtgggacttttacatgcttttcagtggatggatctaaatcattgtgtaaa
gggaacccaagctccacacctgcaaatagcctcttgaaaatacgtaatgtacaaaagggt
cctcagaaaagaatagcctgggacaatgaacttttgtacataccaaaggagggtattaca
gaaatgcttagaagcttcctggatcaatttttatctggagcatacaatatcctgatgcag
tcagtttgtgatgatatcaagagtgagcaccattctatcgagaaatccgatatatctaca
ttcttcaaagtttctcgatttgtcttagctttccaacatgagaaggcttcaaatgaccag
aaatctgttaaagagatccaaccatctgaagtttctcctagcaatgggcatgatgataat
ctaccattccatggtgatatatgtggacctgttgcagccacgttgaatgaagatatgttc
aatatagtcatttccaggtggcgtgaggcatatgagagcctgaaggaaactaatgactac
aatactctttcagcagctgggtctttaatgaagaccatgattgacatgatatatttggtg
ctaaaagtacttcctgaagactcaagggaatctcagacagctcgtgttttactgtacaaa
ctgttctatgatcagacagaacaaggtctcactcaatttctgctgaacttgttcaggtcg
tttgatagtcacaagcaacctaaaagtgatctagcagatttattagagacgattcatatt
atgctacagctcatggaaaaacttcaagcacgcggtgcattaagggtcgcgaaaaggaca
aaaaaaggcagaaaaaagaaggtaagaaatgataaaaacgagaattcagaacccaaagcg
gagaatgtggaaccaaactgtgctgatccaacagatgggaccaaatgtccacctgaatca
gttccagatttgagaactgtggatcctgctgtagagccttctccccaagagcaaggagaa
gtcaatgccagtggtgcacgtgtaccagaaacgcttgtgaatactgcagttaatatggag
ggtactgctaatgctgaaggtgatccatcttgcacagaaggtataatgaaaaccaatctc
atcgatgaagagggcgaggcatcagattcttcaattgatgatcaccagcctgctacaagt
gaagtcgattttaatgtttcccgattaatatccagccttgcaaacaattccgttgtgcaa
aatgtttgctggttgttgaagcactacaaaagtaactcatatcgtacaaatcattacata
atatgcatgcttcggagattctgtgaagatctcgagttgtcaccgatgctctatcagcta
tcacttttaactactttctatgatatactagccgaacagaagttgtccagttcaaaggag
tacacaaacattgtaaattttctttctaaagttgtgaggaaaatgttgagggcaatgaga
aaacagccattgctatttgttgacatattattttggaagacacgcaaggagtgccattgt
atcgatgctgatgcactactgaatgagcttaagaaagatgctgggaacaagaatggtgaa
attggttcaagtaagggatggagaggtccaataaatatagcagattctcttggtgacgat
gaagctgacttggttataccgcaggcaccatatgatgctgataaggatggagacttatca
gctggtgaacatgaggatgattttcagaagagtagtactacatttaaaaggagcagattg
atgtcatttccagacagtgaacctgaggaaaatgagaggaaccatgtatcaagaggttca
ctgagctcggaagttccaaaaagacgaggtcgttctatttttactgaagagcaagagagg
cttatcaaagatctttatggaaaatataaggatgaacgtaaatgcagtcatctaatagct
gaggcgttggaccccaccgggaagatatcttcagctcaaatttctcgtaagcttacacag
ttaggtctcaggaatgccatgtggagaaaaaaggttgcagatggatctctatcaaacatt
gatctggctacagaaccacaaaatgactcacttgatgaacataaccatgatcccaagcct
aaaagctcccggactagcaggaaaaggttacatgggtcaaaccggggccacgatgacaca
agtcatggaagatcatctgatgaagaaacgttacaagtacttaaaagcagagccaaaaat
aagaagcttcccttggtggacagttcactgagtacatcacagcatcaggaagctcagcat
gacccagactctgatgatgcaaccataggatccatgattagaagtggaaaaaagaagagg
ttatccacatcagagtttgaagggaatgtacaaaaccataaagaatcttcaaacaacaca
aacgcgaaggattcttccccaagagcatcacaacataaagaaactctgcaagacaattat
cctgatgatgagggcataggatccatgcttagaagtggaaaaaagaagaggttagtgaat
tcaaacttctcagcgaatatgcaagaaggccaagaacctttgacaaatattgaacttcat
gatgaggctattgcttctaatatcatggatgcttctccaattcatgggcctgatgcagta
aataacagtggcaatacccgtgaagctgaacttttggatgactttgaagttgagctagat
aatcatgaaaacactgaccaaaggataactgatgatgtaaatatcactggatcaggggac
gcaacaaactctgaggctaatcaaaggggtggtttaaaaagaagacacagatcggtaatt
gacgatgatgacgatgatgagtaa
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