Panicum virgatum (switchgrass): 120664607
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Entry
120664607 CDS
T07260
Name
(RefSeq) probable DNA-3-methyladenine glycosylase 2
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
120664607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pvir03400
]
120664607
Enzymes [BR:
pvir01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
120664607
DNA repair and recombination proteins [BR:
pvir03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
120664607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-GeneID:
120664607
NCBI-ProteinID:
XP_039799817
LinkDB
All DBs
Position
3N:15624872..15626117
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AA seq
285 aa
AA seq
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MGRPARSRSPATVPPPPTTELRSTKISFRSRKIVKTPPGKPLTTAAGAPPLTAPAPLLPV
LPALSSPGAIAAALSHLQAADPLLSAVIASTEPPTFAASPSLPAFHSLARSILYQQLATA
AANAIYARFLELLPAAVSDGVTPAAVLALATADLRTIGVSGRKASYLHDLATRFAAGELS
DSAVAAMDESALLAELTKVKGVGEWTVHMFMISLQRPDVLPCGDLGVRKGVQELYNLKTL
PKPEEMAALCERWRPYRSVGAWYMWRLMESKGAAAKKKKKGNASS
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgggccggccggcgcgctcccggtctccggccaccgtgccgcctccgccgactaccgaa
cttcgctccaccaagatctcattccgctcccgtaagatcgtcaagacaccaccgggaaaa
cccctcacaacggccgccggggcaccaccgttaacggcgccggcgcctttacttccagtg
ctgccggcgctttcctcgccgggagcgatagctgccgcgctaagccacctccaagctgcg
gaccccctcctctccgcggtcatcgcctccactgagccccccaccttcgccgcttctccc
tccctccccgcatttcactccctcgcacgctccattctctaccagcagctcgcgaccgcc
gccgccaacgccatctatgctcgtttcctcgaactcctccctgccgcagtctccgacggg
gtaacccctgccgcggtccttgccctcgccactgccgacctgcgcaccatcggcgtctcc
ggccgcaaggcctcctacctccacgacctcgcgaccagattcgcagccggggagctttct
gattccgccgtcgccgccatggacgaatctgcgctcctcgccgagctcaccaaagtgaaa
ggcgttggcgagtggacagtccacatgttcatgatctcgctgcagcgccccgacgtgctt
ccgtgcggcgaccttggcgttcgtaagggcgtgcaggagctgtacaacttgaagaccctg
cccaagccagaggagatggcggcattgtgcgagcggtggaggccctaccggtcagtcggc
gcgtggtacatgtggcgcctcatggagagcaagggcgctgcagccaagaagaagaagaag
ggtaatgcgagctcttag
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