Panicum virgatum (switchgrass): 120664619
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Entry
120664619 CDS
T07260
Name
(RefSeq) eukaryotic translation initiation factor 3 subunit D-like
KO
K03251
translation initiation factor 3 subunit D
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
pvir03012
]
120664619
Translation factors [BR:
pvir03012
]
Eukaryotic type
Initiation factors
eIF-3
120664619
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GFIT
Motif
Pfam:
eIF-3_zeta
NARG2_C
NTP_transf_8
Motif
Other DBs
NCBI-GeneID:
120664619
NCBI-ProteinID:
XP_039799831
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Position
3N:15907291..15909394
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AA seq
582 aa
AA seq
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MGFDVGVVPSHPDGWGPPDVPAIPQSLGGGASVPFAPFSRSDKLGRIADWTRNPAGPAAF
AAASRDSVFDFTSADDSLVAGAEDSSFRLVDAKPPPRQPRFGPKWRFNQRPQLPQRQDEE
VEARRRLAEKERARRDRHFQNNRSHHHPGFRGNQSSSSAKPSVDIQPDWTMREQIPFANF
TKLSFSVADQPEDLLLCGAVEFYDRAYDRVNPKAPRRLERFKSRNFFKVTTTDDPVIRRL
AEEDKATVFATDAILAALMCTPRSIQSWDIVVQRVGNKLFFDKRDGSQLDLLTVNETAQE
QLPENKEDINSAHSLAVEATYINQNFSQQVLHREGEKVTFDEPNPFASEGEEAASVGYRY
RRWKLDDEISLVARCEVHAVNADPSGGRQFLTLNALNEFDPKITGVDWRQKLETQRGAVL
ATELKNNANKLARWTAQALLSGADMMKLGYVSRVHPRDHYNHSVLTVMGYKPRDFAAQIN
LNTANMWGIVKSIVDICMRFEEGKYVFVKDPAKPQVRIYEVPSDAFENDYVEEPLPEEEQ
VRPLADVDATAQEMDAAAEAEANGALVANGGEGDKGAEATAA
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgggcttcgacgtgggcgtcgtcccttcccaccccgacggctggggccctcctgacgtg
cctgcgattccgcagtccctgggcggcggcgcctccgtccccttcgcgcccttctcccgc
tctgacaagctgggacgcatcgccgactggacgcgcaaccccgctggccccgccgccttc
gccgcggcttcccgcgactccgtcttcgacttcacctccgccgacgactcgctcgtcgcc
ggggccgaggactcctctttccgcctcgtcgacgccaagccgccgccgcgccagccgcgg
ttcggccccaagtggcgcttcaaccagcgcccgcagctcccgcagcgccaggacgaggag
gtggaggcgcgccgccgcttggccgagaaggagcgcgcccgccgggaccgccacttccag
aacaaccgctcacaccaccaccctggcttccggggcaaccagtcctcgtcgtcggccaag
ccctccgtcgacatccagcccgactggaccatgcgtgagcagatccccttcgccaacttc
accaagctctccttctccgtcgccgaccagcccgaggacctcctcctctgcggcgctgtc
gagttctacgaccgcgcctatgaccgcgtcaaccccaaggccccgcgccgtctcgagcgg
ttcaagtcccgcaacttcttcaaggtcaccaccaccgacgatcctgtcatccgccgcctc
gccgaggaggacaaagccacggtgttcgccactgatgccatcctcgccgcgctcatgtgc
acgccccgcagcatccaatcatgggacattgtcgtccagcgcgtgggcaacaagctcttc
tttgacaagcgtgatggttcccagcttgacctgctcacagtcaatgagactgcacaggag
cagctccctgagaacaaggaggacatcaactcagcgcactcactcgctgttgaggccacc
tacatcaaccagaacttctcacagcaggtgttgcaccgtgaaggtgagaaggttaccttt
gatgagcctaacccgtttgcttctgagggtgaggaggcagcatctgttggctaccgctat
cgccgctggaagctggatgatgagatcagccttgttgctcgttgtgaggtgcatgctgtc
aatgctgatccaagtggtggtcgtcagttccttactctcaatgctctcaatgagtttgat
cctaagattacaggtgttgactggaggcagaagcttgagacccagcgtggtgctgtcctt
gctacagagctcaagaacaatgcgaacaaacttgctcgctggactgcccaggctttgctt
tctggtgctgacatgatgaagttgggctatgtttcacgggtgcatccacgtgatcactac
aaccattctgtactcactgtaatggggtacaagccaagggattttgctgcacagatcaat
ctcaatactgctaacatgtggggaatcgtcaagtcaattgtggacatttgcatgaggttt
gaagagggcaagtatgtgtttgtgaaagatccagcaaagccacaggttaggatctatgag
gtgccctctgatgcgttcgagaacgattatgttgaagagccacttccagaggaggagcag
gttcgcccgcttgctgatgttgatgccactgcacaagaaatggatgcagctgctgaggca
gaggccaacggtgcattggttgctaacggtggtgagggtgacaagggtgcagaggctact
gctgcttga
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