KEGG   Panicum virgatum (switchgrass): 120664639
Entry
120664639         CDS       T07260                                 
Name
(RefSeq) splicing factor U2af small subunit B-like isoform X1
  KO
K12836  splicing factor U2AF 35 kDa subunit
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120664639
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pvir03041]
    120664639
Spliceosome [BR:pvir03041]
 Complex A
  U2 snRNP components
   U2 related factors
    120664639
 Complex B
    120664639
SSDB
Motif
Pfam: zf-CCCH RRM_1 zf_CCCH_4 Torus zf-CCCH_4 HATPase_c
Other DBs
NCBI-GeneID: 120664639
NCBI-ProteinID: XP_039799852
LinkDB
Position
3N:complement(16048391..16051086)
AA seq 297 aa
MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHNRPTISPTLVLANMYQRPDMITP
GVDAQGQPIDPEKMQEHFEDFYEDIHEELGKFGEIENLNVCDNLADHMIGNVYVQFREEE
QAAAACNALQGRFYSGRPIILEYSPVTDFREATCRQFEENSCNRGGYCNFMHVKQIGRDL
RRKLYGHSASRRYHGRSRSRSPPPQRRGHRDRDDYHRDRDDYRRGGGGGGGGRGRGSRHD
RYDDGGGRGGRPDRYDDGGRRRRGSPPPRRGRSPVRESSEERRAKIEQWNREREAKQ
NT seq 894 nt   +upstreamnt  +downstreamnt
atggcggagcacttggcttccatctttggcactgagaaggatagggtcaactgccctttc
tacttcaagattggggcttgccgtcatggggatcgctgttcccgtctgcacaacaggcca
accatatcaccgactcttgtgcttgctaacatgtatcagcgtcctgatatgataacccct
ggagtagatgctcaaggccaacctattgatcctgagaagatgcaggagcattttgaggac
ttctatgaggacatccatgaggagttgggcaagttcggtgagattgagaacctgaatgtc
tgcgacaaccttgctgaccacatgatagggaatgtctatgtccagttcagggaggaagaa
caggcagctgcagcatgcaatgctcttcagggtcgcttttactctggccgcccaataatt
ttggagtattctcctgtgactgacttccgtgaagcaacctgcaggcagtttgaggagaac
agctgcaaccgtggtggctactgtaacttcatgcatgtgaaacaaattggcagggatctc
aggaggaagctttatgggcattctgcttccaggaggtaccatgggaggagcagaagcaga
agccccccacctcaaaggaggggtcatcgtgatcgtgatgactaccatcgtgaccgtgat
gattaccgtcgtggcggcggcggtggcggcggcggacggggtagaggcagcagacatgac
aggtatgatgatggagggggcagaggcggcaggccagacaggtatgatgatggaggaaga
cgcaggcggggtagcccacccccaaggcgtgggaggagcccagtcagggagagcagcgag
gaacgcagggccaagattgagcagtggaaccgtgaacgggaggcaaagcagtga

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