Panicum virgatum (switchgrass): 120664665
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Entry
120664665 CDS
T07260
Name
(RefSeq) golgin candidate 5-like
KO
K20286
TATA element modulatory factor
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120664665
Membrane trafficking [BR:
pvir04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
120664665
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMF_TATA_bd
TMF_DNA_bd
DUF7491
HMMR_N
Motif
Other DBs
NCBI-GeneID:
120664665
NCBI-ProteinID:
XP_039799885
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All DBs
Position
3N:16371978..16387075
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AA seq
1042 aa
AA seq
DB search
MAWWSGKVSLGGLQDIAGAVNKISESVKNIEKNFDSALGLEEKRGDDEEASGSRTSNSDG
IGFFNPVMAFMGHNGEEDSTEVSKKPQSPKNSPAEEENHSTPMKQQRSEVDASEVSGTTK
SPMQPSKAEEAPNIFTESPVSKADVSEQSMTPQTPTHPSAVEEIFDDPIKPPVSKGDDSE
ASESSQSPTHPSTAEETPSGSIENISSVMNENLDHQDSKHSGPSDEAQPNQLGESGGDIP
DGGASSPTKIDQPGDTKTGESIHIGKEETSDGNALQSQPAESVLASSDGMIEAEDKIDQQ
SDASKEISSPQDSADTVDKATHVEVKVHDENTNTEKNEVESNKTEAGAASVNEQEDIVPE
QPEEFRSKSIIAEHDSHLQNESVVNLTDAPAEPVEVGSPANDFRKEEKTQQSVRSTNSLI
LESAGSVVELEKLRREMKMMDAALQGAARQSQSKADEIARLMNENEQLKATIDDLKTKSS
EAELDVLKDEYHQRVATLERKVYALTKERDTLRREQNKKSDAAALLKEKDEIINQVMAEG
EELSKKQAAQEATIRKLRAQIRELEEEKQRLNSKIQVEETKVESIKRDKAATEKLLQETI
ERNQTELAAQKEFYTNALNAAKEAEALAEARVNSEAKVELESLLREAGEKENMLIKTIEE
LRHSLTRQEQEAAFREERLKRDYDDLQKRYQASELRYNELVTQVPESTRPLLRQIEAMQE
TAARREEAWSGVERTLNSRLQEAEAKAAAAEEKERSVSERLSQSLSRITVLETQITILRT
EQTQLSRSLEKERQRASESRQEYLAIKEEVAIQEGRAKQLEEEIKELRARHKKELQEAAE
HRELLEKDLEREKAARAEIEKTSSREAPKVPIPDQTRNAPLRKLSSSGSINSLEESHFLQ
ASLDLSDNASLERRMSSESNMSYYLRTMTPSAFESALRQKDGELASYMSRLASLESIRNS
LAEELVKMTEQCEKLRTEAAALPGLRAELEALKQRHFQALELMGERDEELEELRNDIVDL
KEMYREQVDLLVSQLQALGARV
NT seq
3129 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggtggtccgggaaggtgtccctgggcgggctgcaggacatcgccggagcagtc
aacaagatcagcgagagtgtgaagaacatcgagaagaactttgacagcgcgctcggctta
gaggagaagcgcggcgacgatgaagaagcatcaggatcacggacatctaactctgatggg
ataggattcttcaatcctgtcatggctttcatgggacacaatggtgaggaggatagcacc
gaagtatcaaaaaagccacaatctccaaagaattcgccagcagaggaagaaaaccatagc
acccctatgaagcagcagagatccgaggtagatgcttctgaagtatcaggaacgaccaaa
tctccaatgcagccttcaaaagcggaagaagctcctaacatcttcactgagtcacctgtt
tctaaggcagatgtttctgagcaatccatgacaccacaaactccaacacatccttcagca
gtagaagaaatttttgatgaccccattaagccaccagtgtctaagggggatgattctgaa
gcatcagaatcatcacaatctccgacccatccttcaacagctgaagaaactcctagtggt
tccattgagaatattagttcagttatgaatgaaaacctggaccatcaagatagcaaacat
tctggtcctagtgatgaagcacagcctaatcagcttggagagtctgggggcgacatacct
gatggtggagcatcttcacctaccaaaatagatcaaccaggtgacactaaaacaggggaa
tctattcatattggaaaggaagagacatctgatgggaacgccttgcagtcacaaccagct
gagtccgtgctggctagctcagatggtatgattgaagctgaggacaagattgatcaacaa
tctgatgcttccaaagaaataagtagcccacaggatagcgctgatacagtagacaaagct
acccatgttgaagtcaaagtacatgacgaaaatactaatactgaaaaaaatgaggtagaa
agcaataagacagaggcaggggcagcatctgtcaatgaacaggaggatattgtgccggag
cagcctgaagaatttagatcgaagtccataattgcagagcatgattcgcatttgcagaat
gaatctgtggtgaatttgacagatgcgcctgctgaacctgtggaagtaggttctcctgca
aatgattttagaaaagaagaaaagactcagcaatctgttagaagcacaaattctttgatt
ctggaatctgctggttctgtcgttgagctagagaaattaagacgtgaaatgaaaatgatg
gatgctgcattgcaaggtgctgcaagacaatctcagtccaaagctgatgaaattgcgaga
ttgatgaacgagaatgagcaactcaaagcaacaattgatgatctcaagactaaatcatct
gaagcagaattggatgtgcttaaggatgaataccaccagagagtagcaactcttgaaagg
aaggtgtacgcactaaccaaagaacgggatactctaaggagagaacagaataaaaaaagt
gacgcagctgcccttttgaaagaaaaggatgagattatcaatcaggtcatggctgaaggt
gaggagttatccaaaaagcaagctgctcaagaagctacaattcgaaaactgagggcacag
attcgtgagcttgaagaagaaaaacaacgtttgaactcaaagatccaggtcgaggagact
aaggttgagagcattaagagagacaaggcagcaactgaaaagttgcttcaagaaacgata
gaaagaaatcagactgaacttgcagctcagaaggagttctacaccaatgctcttaatgca
gctaaagaggctgaggcgttggctgaagcaagagtcaacagtgaagccaaagttgaactg
gagagccttttaagagaagctggtgaaaaagaaaatatgttgattaagacaatcgaggag
ttgaggcattctcttacgaggcaagaacaggaggctgctttccgggaagaaaggctaaaa
agggactatgatgatcttcaaaagcggtatcaagccagtgaacttcgttataatgaactg
gtcacacaagttcctgaatctaccagaccactactaaggcaaattgaagccatgcaggag
acagcagctcggagggaagaagcttggtctggggttgagagaaccttgaactctcgtctt
caggaagcagaagctaaagctgctgctgcagaagaaaaagagcggtctgtaagtgagcga
ttgtcgcaaagtttatcccggataactgttcttgagacccagattacgattcttagaaca
gagcagacacagctgagccgatctcttgaaaaggagaggcagagagcgtctgaaagtaga
caggagtacctagcaattaaggaggaggtggcaatacaagaagggcgggccaaacaactc
gaagaagaaataaaggagcttagggctaggcacaagaaggagctgcaagaagcagcagaa
cacagggaactgcttgagaaggaccttgaaagggaaaaggctgccagggcagaaattgag
aaaacgtcttcccgtgaagcacctaaggttccaattcccgatcaaacaagaaatgcccct
ctaagaaagctttctagttctgggagtataaatagtctggaagaaagccatttccttcaa
gcatcattggatttatcagacaatgcttcattagaaaggagaatgtcttcagaaagtaat
atgtcatattatctgaggaccatgactccaagtgcttttgaatcagcacttcgtcaaaaa
gatggagagctggcttcttacatgtcacgcttggcctcattggaatctattcggaattca
ctggcagaggagttggtgaaaatgacagaacaatgtgaaaagttacggactgaagctgct
gctcttcctggcttaagggccgaattggaagctctgaaacaaaggcattttcaagctcta
gaacttatgggggaacgtgatgaagagctggaagagcttcgaaatgatattgttgaccta
aaagagatgtacagagagcaagtggatcttctggttagccagctccaggcattgggtgcc
cgtgtatag
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