KEGG   Panicum virgatum (switchgrass): 120664672
Entry
120664672         CDS       T07260                                 
Name
(RefSeq) ribosomal L1 domain-containing protein 1-like
  KO
K14775  ribosome biogenesis protein UTP30
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pvir03009]
    120664672
Ribosome biogenesis [BR:pvir03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    120664672
SSDB
Motif
Pfam: Ribosomal_L1
Other DBs
NCBI-GeneID: 120664672
NCBI-ProteinID: XP_039799893
LinkDB
Position
3N:16598024..16599699
AA seq 421 aa
MSPPPPHPVSRETVAGAVASLTKWMKKRAAEAPPNLLADERDDLVVLQLSLRRIPASPTT
RPSLLPLPHPVVGHDGASVCVISDDRPNSRSPPASDLLDASKSLHRLPVSEIIPLSTLRT
DYRPYESRRRLAASHDLFIADRAILPLLPRVLGKAFYSTKKAPIGVDFTRVGWPEQVRKV
LGSAFLYLRSGTCSGIKVGRLDMEEEEIVENVMAAVEAAAEKVPKKWANIRALHLKAVDS
VALPIYQVVPELGMKIEVPQEVESGEVIDDVELETRVKKTDKKKKALMYADANDDKGVAN
ESGKRKRNNKERINDVEMQEEVQAETEKKKRRKSIVVSVDGGQKVGKKGKDKGKHDLENE
VEEPSMDNKKSKKGKIEEGKKRKKNMKGDAEVSADKSHKDKKSKGEKSDGKIKKTRSRVR
V
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgtcgccgccgcctccacacccggtgtcccgtgagacggtggccggcgccgtcgcctcc
ctgaccaagtggatgaagaaacgcgcagcggaggcgccccccaacctcctcgccgacgag
cgcgacgatctcgttgtcctccagctctccctccgccgcatccccgcctcgcccaccacc
aggccgagcctactcccgctcccgcaccccgtcgtcgggcacgacggcgcctccgtctgc
gtcatctccgacgaccgccccaactcgcggtccccgcctgcctccgacctcctcgatgcg
tctaagtcgctccaccgcctccccgtctccgagatcatcccgctctccacgctccgcacg
gactaccgcccgtacgagtcgcgccgccgcctcgccgcctcccacgacctcttcatcgcc
gaccgcgccatcctcccgctgctgccgcgcgtcctcgggaaggcgttctactccaccaag
aaggctccgattggagtcgatttcacccgcgtcgggtggccggagcaggtccgcaaggtg
ctgggctccgcttttctgtacctgcggtcggggacctgctcggggatcaaagttgggagg
ctggacatggaggaagaggagatcgtggagaatgtgatggctgcggtggaggcggctgcg
gaaaaggtgccgaagaagtgggccaacattagggcgctgcatctgaaggctgtggattca
gttgccctgccaatttaccaggtcgtgccagagttgggtatgaagattgaggtgcctcag
gaagttgaatctggggaggtcattgatgatgtggaattggagactagggtgaagaagact
gacaagaagaagaaggcattgatgtacgctgatgccaatgatgataagggagttgccaat
gagagtggcaagaggaagaggaataataaggagcggattaacgatgttgaaatgcaggaa
gaagttcaggcagagacagagaaaaagaagaggaggaagagtattgtggtttctgttgat
gggggccagaaggttggcaagaagggtaaagataagggcaagcacgatttggaaaatgag
gtggaagaacccagtatggacaataagaagagtaagaaggggaagattgaagagggcaag
aaaaggaagaagaacatgaagggtgatgctgaagtctcagcagataaaagccacaaagat
aagaagagcaagggggagaaatctgatggcaagatcaagaagacaaggagcagggtaaga
gtataa

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