Panicum virgatum (switchgrass): 120664707
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Entry
120664707 CDS
T07260
Name
(RefSeq) syntaxin-71-like
KO
K08506
syntaxin of plants SYP7
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120664707
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pvir04131
]
120664707
Membrane trafficking [BR:
pvir04131
]
SNARE
SNAP-25[C] (Qc)
Syp7
120664707
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Gene cluster
GFIT
Motif
Pfam:
SNARE
STX6_10_61_N
PYNP_C
COG6_N
Motif
Other DBs
NCBI-GeneID:
120664707
NCBI-ProteinID:
XP_039799941
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Position
3N:complement(16995164..16998998)
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AA seq
270 aa
AA seq
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MTVIDILTRVDAICQKYDKYDVDKRNGANVAGDDPFARLYASVDADVNQCVEKAEAAKQE
KNRAAVVALNAEIRRTKAKLLEEDLPKLQRLAVKKVKGLTKEEIATRSDLVAALPARIQS
IPDGSSTATKKNGTWGASGSRTGGAIQFDTTADGNFDDEYFKGTEESNQFRREYEMRRMK
QDEGLDAIGEGLETLKNMASDMNEELDRQVPLMDEMDDKVDRANADLKNTNVRLKETVLQ
LRSSRNFCIDIILLCVILGIAAYLYNVLKK
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtgatcgacatcctcacgcgggttgacgcgatctgccagaagtacgacaagtac
gatgtcgacaagcgcaacggcgccaacgtcgccggcgacgaccccttcgcccgcctctac
gcctccgtagacgccgacgtcaaccaatgcgtcgagaaagcggaggcggcgaagcaagag
aagaacagggccgcggttgtggcgctcaacgctgagatccggcgcaccaaggccaagctc
ctcgaggaggacctgccaaagctgcagcgcctcgccgtgaagaaggtgaaagggctcacc
aaagaggaaattgcgacccgcagtgatctggttgccgcattacctgcaagaatacagtca
atcccggatggtagttctactgccacaaagaaaaatggaacttggggagcctcaggatct
cgcactggaggagccatacagttcgacactactgctgatgggaactttgacgatgagtac
tttaaggggacagaagaatcgaaccagttccgccgggaatatgagatgcgcagaatgaaa
caggatgaaggtttggatgctattggtgaagggctggaaactctgaaaaacatggcatct
gacatgaatgaggaattggacagacaagttcctttgatggatgaaatggatgacaaggtg
gatagagcgaatgcagatttgaagaatactaacgttagactgaaggagactgttcttcag
ctgagatcgagtcgcaacttttgcattgatatcatccttctctgtgtcattcttggtatt
gcggcctacctttacaacgtgctaaaaaagtga
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