KEGG   Panicum virgatum (switchgrass): 120664707
Entry
120664707         CDS       T07260                                 
Name
(RefSeq) syntaxin-71-like
  KO
K08506  syntaxin of plants SYP7
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    120664707
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120664707
Membrane trafficking [BR:pvir04131]
 SNARE
  SNAP-25[C] (Qc)
   Syp7
    120664707
SSDB
Motif
Pfam: SNARE STX6_10_61_N PYNP_C COG6_N
Other DBs
NCBI-GeneID: 120664707
NCBI-ProteinID: XP_039799941
LinkDB
Position
3N:complement(16995164..16998998)
AA seq 270 aa
MTVIDILTRVDAICQKYDKYDVDKRNGANVAGDDPFARLYASVDADVNQCVEKAEAAKQE
KNRAAVVALNAEIRRTKAKLLEEDLPKLQRLAVKKVKGLTKEEIATRSDLVAALPARIQS
IPDGSSTATKKNGTWGASGSRTGGAIQFDTTADGNFDDEYFKGTEESNQFRREYEMRRMK
QDEGLDAIGEGLETLKNMASDMNEELDRQVPLMDEMDDKVDRANADLKNTNVRLKETVLQ
LRSSRNFCIDIILLCVILGIAAYLYNVLKK
NT seq 813 nt   +upstreamnt  +downstreamnt
atgaccgtgatcgacatcctcacgcgggttgacgcgatctgccagaagtacgacaagtac
gatgtcgacaagcgcaacggcgccaacgtcgccggcgacgaccccttcgcccgcctctac
gcctccgtagacgccgacgtcaaccaatgcgtcgagaaagcggaggcggcgaagcaagag
aagaacagggccgcggttgtggcgctcaacgctgagatccggcgcaccaaggccaagctc
ctcgaggaggacctgccaaagctgcagcgcctcgccgtgaagaaggtgaaagggctcacc
aaagaggaaattgcgacccgcagtgatctggttgccgcattacctgcaagaatacagtca
atcccggatggtagttctactgccacaaagaaaaatggaacttggggagcctcaggatct
cgcactggaggagccatacagttcgacactactgctgatgggaactttgacgatgagtac
tttaaggggacagaagaatcgaaccagttccgccgggaatatgagatgcgcagaatgaaa
caggatgaaggtttggatgctattggtgaagggctggaaactctgaaaaacatggcatct
gacatgaatgaggaattggacagacaagttcctttgatggatgaaatggatgacaaggtg
gatagagcgaatgcagatttgaagaatactaacgttagactgaaggagactgttcttcag
ctgagatcgagtcgcaacttttgcattgatatcatccttctctgtgtcattcttggtatt
gcggcctacctttacaacgtgctaaaaaagtga

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