Panicum virgatum (switchgrass): 120664709
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Entry
120664709 CDS
T07260
Name
(RefSeq) transcription factor RAX1-like
KO
K09422
transcription factor MYB, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120664709
Transcription factors [BR:
pvir03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
120664709
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SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
120664709
NCBI-ProteinID:
XP_039799944
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All DBs
Position
3N:complement(17019119..17020560)
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AA seq
261 aa
AA seq
DB search
MGRAPCCDKGSVKRGPWSPEEDEQLRSYVRRHGIGGNWIALPQKAGLNRCGKSCRLRWLN
YLRPDIKHGGYTEQEDRVILSLYSSIGSRWSIIASKLPGRTDNDVKNYWNTKLKKKAVAA
ASNGAFASPATSSVTSSSGDARFAAYPPQPQAQQQQGLIRFDAPRSTELAPVPPVAQLGG
AAWASPAAASGAVAALDDDVFLPDLVGGGGGVEQLFPYGDFYAGLQDRALELSACYFPNM
AEMWGAAASDAKPQGLCNTLT
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcgcgccgtgctgcgacaaggggagcgtgaagcgggggccctggtcgccggag
gaggacgagcagctgcggagctacgtccggcgccacggcatcggcggcaactggatcgcc
ctgccgcagaaagcagggctgaaccggtgcggcaagagctgccggctccggtggctcaac
tacctgcggccggacatcaagcacggcggctacacggagcaggaggaccgggtcattctg
tcgctctacagctcgatcgggagcaggtggtcgatcatcgcgtccaagctccccggccgg
accgacaacgacgtcaagaactactggaacaccaagctcaagaagaaggccgtggcggcg
gccagcaacggagccttcgcctcgcccgccacctcgtccgtgaccagctcgagcggggac
gcgcgcttcgccgcgtacccgccgcagccacaggcgcagcagcagcaggggctgatccgc
ttcgacgcgccgcggagcaccgagctcgcgcccgtgccgcccgtcgcgcagctgggtggt
gccgcgtgggcgtcgcccgcggcagcgagtggcgccgtggcggcgctggacgacgacgtg
ttcctgcccgatctcgtcggcggcggcggcggcgtcgagcagctgttcccgtacggcgac
ttctacgccgggctgcaggaccgggctctggagctctcggcgtgctacttccccaacatg
gccgagatgtggggcgccgctgcctccgacgccaagccgcagggcctctgcaacaccttg
acatag
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