Panicum virgatum (switchgrass): 120664764
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Entry
120664764 CDS
T07260
Name
(RefSeq) farnesyl pyrophosphate synthase-like
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00900
Terpenoid backbone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120664764
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
pvir01006
]
120664764
Enzymes [BR:
pvir01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
120664764
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
120664764
Prenyltransferases [BR:
pvir01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
120664764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Pfc11_Rna14-15-ID
Motif
Other DBs
NCBI-GeneID:
120664764
NCBI-ProteinID:
XP_039800030
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All DBs
Position
3N:17894975..17898472
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AA seq
353 aa
AA seq
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MAAGGNGAAGGGADTKAAFAQIYKTLKEELLADPAFEFTAEAHQWIDRMIDYNVLGGKCN
RGLSVVDSYKLLKGADVLGEEELFLASTLGWCIEWLQAYFLVLDDIMDDSHTRRGQPCWF
RVPHVGFIAVNDGIILRNHISRILRHQFKGKPYYADLLDLFNEVEFKTASGQLLDLITTH
EGEQDLTKYNITVHRRIVQYKTAYYSFYLPVACALLLSGENLDNYGAVENILVEMGTYFQ
VQDDYLDCYGDPEFIGKIGTDIEDYKCSWLVVQALECADESQKHILFENYGKKDPACVAK
VKNLYKELNLEAVFQDYEKESYKKLIADIEAQPSIAVQSVLKSFLHKIYKRQK
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgggcgggaacggcgcggccggcggcggcgccgacacgaaggcggcgttcgcg
cagatctacaagacgctcaaggaggagctgctcgccgaccccgccttcgagttcaccgcc
gaggcgcaccagtggatcgaccgcatgattgactacaatgtacttggaggaaagtgcaac
cgtgggctctctgtggttgacagctacaagctgttgaagggtgctgatgttctgggcgag
gaggagttgtttcttgcttccactcttggctggtgcattgaatggcttcaagcttacttt
ctggtgcttgatgacatcatggatgactcccacactcgccgaggccagccatgttggttc
agggtgcctcatgttggcttcattgctgtgaatgatgggattatccttcgcaaccatatt
tcaaggatcctgcggcaccaatttaagggcaaaccttactacgctgatctccttgattta
ttcaatgaggttgagttcaagacagcttcaggacagctgcttgaccttatcacaactcat
gagggagaacaagatttaacaaagtacaacataacagttcaccggcgtattgttcaatac
aagacagcctactattcattttatctgccggttgcatgtgcactgctgctctctggtgag
aatttggacaactatggtgctgtagagaacattcttgttgaaatgggaacgtactttcaa
gtccaggatgactacctagattgctatggtgaccctgaattcattggcaagattggaact
gacattgaagattacaaatgctcctggctagttgtgcaagctctcgagtgtgctgatgag
agccaaaagcacattctatttgaaaattatggcaagaaagatccagcctgtgtggcaaaa
gtgaagaatctctacaaagaactcaacctagaggctgtattccaggactatgagaaggag
agctacaagaagctaattgccgatattgaagcccagccgagcatcgctgttcagagcgtg
ctgaagtccttcttgcacaagatttacaagaggcagaagtag
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