Panicum virgatum (switchgrass): 120664797
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Entry
120664797 CDS
T07260
Name
(RefSeq) myosin-17-like isoform X1
KO
K10357
myosin V
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
120664797
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120664797
04131 Membrane trafficking [BR:
pvir04131
]
120664797
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120664797
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120664797
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
120664797
mRNA cycle factors
P-body specific factors
120664797
Membrane trafficking [BR:
pvir04131
]
Others
Actin-binding proteins
Myosins
120664797
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
120664797
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
120664797
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
Myosin_N
IQ
DDE_Tnp_1
Translat_reg
S1
AAA_16
Motif
Other DBs
NCBI-GeneID:
120664797
NCBI-ProteinID:
XP_039800072
LinkDB
All DBs
Position
3N:complement(18308669..18332765)
Genome browser
AA seq
2156 aa
AA seq
DB search
MASTLKIVVGSHIWMEDKDLAWIDGEIFRIEDRNVHVRATNGKMVIVSISDIHTKDTEVP
SNGIDDMTRLSYLHEPGVLNNLAIRYAKNIIYTYTGNILIAINPFQRLPHLSDPYTMEKY
KGANFGELDPHVFAIADVSYRQMMNEGKSNSILVSGESGAGKTETTKMLMTYLAFLGGRS
RTGGRTVEQQVLESNPVLEAFGNAKTVRNNNSSRFGKFVEIQFDKSGKISGTAIRTYLLE
RSRVCQINSPERNYHCFYFLCAAPSEDIKRYKLADPSSFHYLNQSTCIKLDEISDAKEYL
ATRSAMNTVGITEQEQEATFRVVAAILHLGNISFVKGREVDSSLLKDEKARFHLNAAADL
LMCDCGNLENALIKRKINTPEGVITTTVDPNSATVSRDGLAKQIYSRLFDWLVNRLNASI
GQDTSSDRLIGVLDIYGFESFKTNSFEQLCINFTNEKLQQHFNQNVFKMEQEEYNREQID
WSYIEFVDNQDVLDLIEKKPGGIIALLDEACMFPKCTHESFSQKLYEKFKNNKRFSKPKL
SRTAFTIQHYAGEVTYQSDHFLDKNRDYVVVEHQELLNASRCSFVSGLFPSVLEENTKAS
KTSIATRFKWQLQELMETLSSTEPHYIRCIKPNNILKPTTFENISVLQQLRCSGVLEAIR
ISCAGYPTRKIFHDFLCRFRILAPEIFIERNNEKVSCQKILDKMELHGYQIGRTKVFLRA
GQMAELDARRTEVRNKAARAVQSRFRTHAAREKFLVLRKTSISFQSFVRVILACKLRVLM
RKQAAALQIQKSYRCYVAWNSYSKLRSSAITLQAGLRVFGAYKEFNIRKQNKASIRIQAW
WRCHRDYSNYCKIKRSVLIYQCAWRRRVARGELRKLKMAARDTEALKLEKEKLEEHVEEL
TSRLGLEKKLRTDLEKNKAGEISKLQAALREMERRVEEATEMQERELAKRAIEEALAQER
EKITSLTNEVEELKVLLLREREENSATKSALVNAQEENDALTRKIVVADENMEQLRGTVK
RFEKNVTELESSLMMEKEQNMTTRRELSEAHQRVEELLREIADTNGKSTELQTAVQRLQK
ILIEGESTLLTERQESEATKKSLNEAHAKIEELLNKIKVAEQDISNFQDNTQRLEVTATT
LETSLLAEKQQSTAIFSQLAEAQQDIEVLQKKFADANRTNDLLQDSLKRCEENATTRDGL
YVAERKEHDETKQALLKAQERNWELLWKVDDSEKTINKMLENAQRLEKHATARESLLLKT
KQNLDCTTKALTEARGRNRDLMTSLEDSAKKINMLEDSVSRLEECIAEKDSLLEVERQEH
KTTNKDVDNARKKITELIHESQQSEETRKQLEDTIKRFEADATAKDAFLLSEKQEHEMTK
KVLTETQWRNEELIKKIQDHDKNIFQLQLTIERLQENASATEVLMLREREQNNATMKAQA
ESQERNLQFLKKLEDVDKKIGLLQGSVQRLGDNTAKDALLLSERREKDALKKALTESEYK
NEELLMKTEEANKKVEHLQNTINSIKEDMAASLEAERQENETIRRSLVEAQERNDVLFKK
VRDSEYRAHQLQDTVQKLQVDAISRLSNFGMEKQEGAVVKNVHTETHGRNENLIRRNEDL
LKRNDDLVKKIEDSGKLVTQLHENLERLEVKSANLESENQALRQQAITTPPSTAKSQAAC
SKISMIHRCQENGHILNGNAAYAEMKSSLGPTETRASMGSSPDLISYKDYENGQRLLNEV
YQPFQHQQPLNHQQLLLKYITQYLGFSGSKPIAAPLIFYCLLHWRSFEEAKTGVFDTIIQ
VVNSATEAQHDTRVLAYWLSNLSTLSVLLQRSFKVSRTTVSTPHRRRFSCERIFQANQAP
NNGLAYFSAQIDGAIGFHQIEAKYPALLFKQQLVDQIEKVYGMISDRMKKELNPLLELCI
QDPRTSYSTQAKASLSPASGFGQQEQLMHWLSIVKIFNNYLHVLRANHVPTILVHKLLTQ
IFSMVNVQLFNRLLLRRECCSYSNGQYIKDGLTQLKHWCNDVSREFADSAWAALRYIRQA
VDFVVISLKPIRTWDEIRNDICPDLSLQQLERIVGMYWDDVNGTNVTSAEFISSMRATMR
EEPNSVSSFSVLLDDDSSIPFSLEDIAKSMLNIEETSINDLLPFIRENQGFTFILQ
NT seq
6471 nt
NT seq
+upstream
nt +downstream
nt
atggcttccacattaaaaattgtggtaggctctcatatatggatggaggataaagatctt
gcttggatcgatggtgagattttcagaattgaagatcgaaacgtccatgtccgtgctact
aatggaaagatggttattgtgagcatatctgacattcatacaaaggacacggaagtgcca
tctaatggcattgatgacatgacacggctatcatacttgcatgaacctggtgttctaaat
aatcttgctattcgatatgcaaaaaatatcatatatacctatactggcaatattctgatt
gcaattaatccattccaaaggctgcctcatctttctgatccctatactatggagaagtac
aaaggtgcaaattttggtgagctagaccctcatgtatttgcaattgccgatgtttcttac
aggcagatgatgaatgagggaaagagcaactccattttggtgagcggtgaaagtggtgct
ggtaaaactgaaaccacaaagatgcttatgacatatcttgcttttttgggtggacgatct
agaacaggagggaggacagttgaacaacaagttttagaatctaatccagtccttgaagcc
tttggcaatgcaaagactgttcgtaataacaactcaagtcgatttggcaaatttgttgaa
atccaatttgataagagtgggaagatatcaggcactgccattagaacatacttgcttgaa
agatctcgtgtttgccaaatcaatagtccagagagaaactatcattgcttttacttccta
tgtgcagcaccatcagaggatatcaaaaggtataagctggctgacccgtcatcgtttcac
tatctcaaccaatccacgtgcattaaacttgacgaaattagtgatgctaaggagtatctt
gcaacacgaagtgcgatgaatacagttggcattactgaacaggagcaggaggctacattc
cgggtagttgctgctattctccaccttgggaatatcagttttgtgaaagggagagaggta
gattcatctttactaaaggatgagaaagctaggtttcatcttaatgcagcagcagatctc
ttgatgtgcgattgcgggaatctggagaatgcattgataaagagaaaaataaatacacca
gaaggcgttataaccacaacagttgatcctaattccgctactgttagtagggatggctta
gcaaagcaaatatattctcgactatttgactggcttgtaaacagactaaatgcatccata
ggacaagatacatcctccgaccgattgattggagtacttgatatctatggttttgaaagt
tttaagactaatagctttgaacaattatgcatcaatttcaccaacgaaaaactccaacag
cattttaatcagaatgtttttaaaatggagcaggaagagtacaacagggagcagattgac
tggagttacatagaatttgtcgacaaccaagatgttctggacttgattgagaagaaacct
ggtggaattattgcacttcttgatgaagcttgtatgtttcctaaatgcacacatgaatca
ttttcccagaagttgtatgagaaattcaagaataacaaaagatttagtaagccaaagctt
tctcgcactgcatttaccatacaacattatgcgggagaagtaacctatcagtctgaccat
ttcctggacaaaaacagagactatgtagttgtagaacatcaagagttacttaatgcttcc
aggtgctcatttgtgtcagggttattcccatcggtactagaggagaacacaaaagcatca
aagacttccattgctactcgcttcaagtggcaactccaagaactaatggagacattgagt
tctactgaacctcattacattagatgcattaagcccaacaatattcttaagcctactaca
tttgagaacatcagtgtactgcaacaacttcggtgttcaggtgttcttgaagctattaga
atcagctgtgctggatatcctacaagaaaaatatttcatgattttctctgtcggtttcgc
attcttgctcctgaaattttcatagaaagaaacaatgaaaaggtgtcgtgccaaaagatt
ctagacaagatggaactccatggttatcagattggaagaacaaaagtgttcctgagagct
ggtcagatggctgaattagatgctagaagaactgaagtgcggaataaagcagctagagct
gttcagagtagatttcgcactcatgctgctcgtgagaaattccttgtattacgcaagaca
tcaatatcttttcaatcttttgttagagtaatactcgcttgtaagttacgtgttctaatg
agaaaacaagctgcggcattgcaaatacagaaaagttaccgctgctatgttgcttggaac
tcttattctaagttacgctcttcagcaattacgctgcaggcaggattaagggtgtttggt
gcttataaggaattcaatatcagaaaacaaaataaagcctctattcgtatccaggcttgg
tggcgatgccatagagattattctaactattgtaaaattaagagatcagtgttaatttat
cagtgtgcatggagaagacgggttgctagaggcgaactcagaaagctcaaaatggctgca
agggacacagaagccctaaagttggagaaggagaaacttgaggagcatgttgaagagttg
actagccgtttaggcttggaaaagaaacttaggactgatctagagaagaacaaagcagga
gaaatttccaaactacaggctgctcttcgtgaaatggagcggcgggtggaagaagccaca
gagatgcaggaaagagaattagccaaaagggccattgaagaagctttggctcaagaaaga
gaaaagatcacttcattgactaatgaagttgaggagctgaaggttctactactaagagaa
cgagaagaaaatagtgcaactaagagtgcacttgtgaatgctcaggaagaaaatgatgca
ttgactagaaaaattgtggttgcagatgaaaacatggagcaacttagaggtactgtgaag
agatttgaaaagaatgtgacagaactagagtcttcactaatgatggaaaaggaacaaaac
atgactactagaagggaactaagtgaagcacaccaaagggtggaagaactactgagggaa
attgcagataccaatggaaaatccacagagcttcagactgctgtacaaaggctgcaaaaa
atcttaattgagggagagtctactttacttacagaacgacaagaaagtgaggcaaccaag
aaatcactcaatgaagctcatgcaaaaatcgaggaactactcaataaaattaaagtagct
gaacaagacattagtaacttccaagacaacacccaaagactcgaagtaactgcaacaaca
ttggagacttcattgttagctgaaaaacaacagagtactgcaatcttttcacaattagct
gaagcacaacaggatattgaagtactgcagaagaaatttgcagatgctaataggacaaat
gatttgcttcaagattctttgaaaaggtgtgaggaaaatgcgaccacaagggatggctta
tatgtagcagaaaggaaagagcatgatgaaaccaagcaagcacttttgaaagctcaggaa
agaaattgggaattgctttggaaagttgatgatagcgagaaaactataaacaagatgttg
gagaatgctcagagacttgagaagcatgcaacagcaagggaatctttgcttcttaagaca
aaacaaaatctcgactgcacaacaaaagcattaactgaagctcgagggaggaaccgagac
ttgatgacaagtctcgaggattcagctaaaaaaatcaatatgcttgaggattcagttagc
agactagaagaatgcatagcagagaaagactctttgttggaagtagaaaggcaagaacac
aaaacaactaacaaagatgtagacaatgcccggaaaaagatcactgaattaattcacgag
tcacaacagtccgaagaaacaagaaaacaattggaagataccatcaagaggtttgaagca
gatgctactgccaaagatgcatttttgttatcagaaaaacaagaacatgagatgaccaag
aaagttctaactgaaactcagtggagaaatgaggagttaatcaagaaaattcaggatcat
gataaaaatatatttcagcttcagctaactattgagaggcttcaggaaaacgcatctgct
acagaggttttaatgttgagagaacgagaacaaaacaatgcaaccatgaaagcacaagct
gaaagtcaagaaagaaatttgcaatttctaaagaagcttgaggatgttgacaaaaaaatt
ggtcttcttcagggcagcgtgcaaaggcttggtgataatacagcaaaagatgctttgctg
ctatctgagagacgtgagaaggatgcattgaagaaagcacttactgagagtgaatacaaa
aatgaagagctactgatgaaaactgaagaagccaacaaaaaagttgagcatcttcaaaac
actataaattcgattaaggaggatatggcagcttcattggaagctgaaagacaagaaaat
gaaacaatcaggaggtcccttgttgaagctcaggagagaaatgatgtgttatttaagaaa
gttagggatagtgaatacagggcccaccagcttcaagatactgtgcagaagcttcaagta
gatgccatatcaagattgtctaactttggaatggagaaacaagaaggcgctgttgtaaaa
aatgtacatactgagactcatggaagaaatgaaaatctaataagaagaaatgaagacctc
ctaaaaagaaatgatgatttggtgaagaagattgaagattctggtaaacttgttactcag
cttcacgagaacctagaaaggttagaagtcaaatcagccaacttagagtccgaaaatcaa
gcgcttcgtcaacaagcaattacgactcctccatctaccgccaagtctcaagctgcatgc
tctaaaatcagtatgatccatagatgtcaagaaaatggtcatattttaaatggcaacgca
gcatatgctgaaatgaagtcctcacttggtccaacagaaacaagagcctcaatgggcagt
tcccctgatttgataagctacaaggattatgaaaatgggcaaaggttacttaacgaagta
tatcagccttttcagcaccagcaacccctgaatcatcagcagttattgctgaaatacatt
acccagtatcttggattttctggcagtaaaccaattgctgctcctcttatattctattgt
cttcttcattggagatcttttgaagaagcaaagacaggtgtctttgacactattatacaa
gttgtaaactcagcaactgaggctcaacatgatacaagggtgctggcctattggttatcc
aacttgtccacactatcagttctactgcaacgttcatttaaagtctctaggacaacagtc
tcaactccacatagacgaagattttcatgcgagaggatttttcaagccaatcaagctcca
aacaatggacttgcttatttcagtgctcaaatcgatggagctattgggtttcaccaaatt
gaagcaaaatatccagctttgctcttcaaacagcagctagtggatcagattgaaaaggtg
tacggaatgataagcgatagaatgaagaaggagctaaacccattacttgagctgtgtatc
caggatccaagaacttcttactcgactcaagcaaaggcctcgctgtctcctgctagcggt
tttggccaacaggaacaactcatgcattggctgagcatcgtgaaaattttcaacaactat
ctgcatgttctcagagccaatcatgttcccacaattttggtccacaaattgcttacccag
atattttctatggtcaatgtacaattatttaacaggctcctcttgcgacgtgagtgttgt
tcctatagcaacgggcaatacatcaaagatggactaactcaactaaaacattggtgcaat
gatgtcagtcgagagtttgcagattccgcatgggcagcactgaggtatataagacaagct
gttgacttcgtggtaatttctctaaagccaataaggacatgggatgagatacgcaatgat
atttgcccggatctcagtttgcagcagctagagaggatagttggtatgtattgggacgat
gtaaatggaacgaatgtaacttcagctgagttcatatcaagcatgagagctacaatgcgt
gaggaaccaaatagcgtctccagcttttcagttcttctggatgatgattccagcataccc
ttttcacttgaagatattgccaagtccatgctaaacattgaggagacgtcaattaatgac
ctgctaccttttatccgcgagaaccagggctttacctttatattgcagtag
DBGET
integrated database retrieval system
