Panicum virgatum (switchgrass): 120664829
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Entry
120664829 CDS
T07260
Name
(RefSeq) RGG repeats nuclear RNA binding protein A-like isoform X1
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120664829
Spliceosome [BR:
pvir03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120664829
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Cwf_Cwc_15
Motif
Other DBs
NCBI-GeneID:
120664829
NCBI-ProteinID:
XP_039800115
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All DBs
Position
3N:complement(18608078..18611305)
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AA seq
384 aa
AA seq
DB search
MATLNPFEILGADDNDDPTQLLAAAAAAKQKAEAKKQAAAAAAATGKGAQPAPAKLPTKP
APPAQAGEFGVRLVRESRSGGAPSRGGYGRGERGRGRGGRGYGQNREYGSEDANGFQGGY
GAGGGARAGGEEGAQDRGPRPPYRVGGGGRRGGYRDGEFGDDSERPYRRTYERHSGTGRG
FEMKREGAGRGNWGTTTDEIIAQETEEGLKLDEKAPVPEKQGALEDAPQAEENKDNKDTN
EEEEKEEDKEMTLEEFEKIREEKRKALLALKTEERKVEVDKDLQSMQPLSTKKGNDEIFV
KLGSDKDALKKKENAERDERAKKSLSINEFLKPADGERYYGGRGRGRGRGDRGGFRTGYG
GGYRAPPAAPAIQDQSQFPSLGGK
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctcaatccctttgaaatcctgggcgccgacgacaacgacgatcccacgcag
ctgctggccgctgctgcggcagcgaagcagaaggccgaggcgaagaagcaggcggcggcg
gcggcggcggccacaggaaagggcgcgcagccagcccccgccaagttgccaaccaagcct
gctcccccagcccaggccggtgagttcggagttcggttagtgagggagtctcgcagtggt
ggtgctccctctcgtggaggatacggacgtggcgaacgcggccgtggcagaggcgggcga
gggtatggccagaaccgtgagtatggcagcgaagatgctaatgggtttcagggaggatat
ggtgctggaggtggtgccagagctggaggtgaagaaggtgcccaagacagaggtcctcgg
ccaccctaccgtgtaggcggaggaggccggcggggtgggtaccgtgatggtgagtttggc
gatgactctgagaggccataccggaggacctatgagcgccatagcggtaccggccgtggg
tttgaaatgaagcgtgagggtgcagggcgtgggaactggggaactaccactgatgaaatt
atcgcccaggaaactgaggaaggcctgaagctggatgagaaggcccctgttccagagaag
cagggtgcactggaggatgctccacaggcagaggagaacaaggataacaaggacacaaat
gaggaagaagagaaggaagaggataaggagatgaccctggaggagtttgagaaaataagg
gaggaaaagcggaaggcacttcttgccctaaagactgaagagaggaaggttgaagttgat
aaggacctgcagtctatgcagccgctttccactaagaaaggaaatgacgaaattttcgta
aaactgggttctgataaggatgctctgaagaaaaaagaaaatgctgaacgcgatgagcgt
gctaagaagtctctgagcatcaatgagttcttgaaacctgctgatggagaaaggtactat
ggtggccgaggtcgtggtaggggtcgtggtgaccgtggtggcttcagaacaggatatggt
gggggttaccgtgctccaccagctgctcctgcaattcaagatcaatcccaattcccgtca
cttggtgggaagtga
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