Panicum virgatum (switchgrass): 120664892
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Entry
120664892 CDS
T07260
Name
(RefSeq) nuclear pore complex protein NUP35-like isoform X1
KO
K14313
nuclear pore complex protein Nup53
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120664892
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pvir03019
]
120664892
Messenger RNA biogenesis [BR:
pvir03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120664892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120664892
NCBI-ProteinID:
XP_039800209
LinkDB
All DBs
Position
3N:19281315..19288428
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AA seq
322 aa
AA seq
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MASPSRSPAASRRGRSARQSPFFRDLASPIPSHRGVSRFASAASPSATPPPPPIFTLDDR
YASEDFSPDPTASDLLPLVSSPSPRAAASRSPSWDRPRGGVSLPAPGSPMDGVVEPARKE
VLALPSPESPGTPPPAMTAEAQSPVTPAQAPVRTEPVANGGEAEREEWVTVFGFSTGDTN
LVLREFEKCGVILRHQSGPRYGNWIHILYQCSYDARKALQKNGIQLSSGLIVGVKSIDPV
HRQQLDKRLIGSNQGGFMVSLPSKPLTLKNTGASNQLGALPRPYDPKANTNVNRDAGRRA
TGSVAAPAKSIVTNVMDLIFGI
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcttccccctcccgctcccccgccgcctcgcgccgcggccgcagcgcgcggcagtcc
cccttcttccgcgacctcgcctccccgatcccgtcccaccgcggcgtctcccgcttcgct
tcggccgcgtccccctccgccacgccgccgccgccgcccatcttcaccctcgacgaccgc
tacgcctccgaggacttctccccggaccccacagcctccgacctccttcccctggtttca
tccccttccccccgcgccgccgccagccgctcgccgtcatgggaccggccccggggcggg
gtgtcgctcccggcaccgggatcccccatggatggggtcgtggagccggcccggaaggag
gtgctcgctttgccttctcccgagagccctggcaccccacctccagctatgacagcggag
gcgcagtcgccggtgacccccgcgcaagcaccggttaggacggagccggtggctaacgga
ggcgaggctgagcgggaagagtgggtcaccgtattcggattctctactggagataccaac
cttgttcttcgggaatttgagaaatgtggagtaatattgagacatcagtctggtccaaga
tatggtaactggatccacatattgtaccagtgctcatatgacgctcggaaggcccttcag
aaaaatggtatccaactaagcagtgggctcatagttggagtgaaatccattgatccagtg
caccgtcagcagctggataagaggttaattggaagcaatcaaggaggtttcatggtgtcc
ttgccttcaaagccacttaccctgaagaacacaggtgcatccaaccagctaggagctttg
ccccggccatatgacccgaaggctaacacaaatgttaaccgagatgcaggccgtcgtgca
accggcagcgttgctgcaccagcaaaatcaattgtaaccaatgtcatggatttgatattt
ggcatttga
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