Panicum virgatum (switchgrass): 120664929
Help
Entry
120664929 CDS
T07260
Name
(RefSeq) auxin response factor 14-like isoform X1
KO
K14486
auxin response factor
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
120664929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Auxin_resp
B3
Motif
Other DBs
NCBI-GeneID:
120664929
NCBI-ProteinID:
XP_039800253
LinkDB
All DBs
Position
3N:complement(19675663..19682002)
Genome browser
AA seq
681 aa
AA seq
DB search
MGIDLNAVEEDEPAGAVCGELWHACAGAGVALPRRGSAVVYLPQAHLAAGGCGDGMEVPA
GPAARVPPHVACRVVDVDLRADAATDEVYARLALVAEGKMFDQDIHDAEIEEKNCEMEDG
DGEKKLRTSHMFCKTLTASDTSTHGGFSVPRRAAEDCFPPLDYDQLRPSQELIAKDLHGM
KWRFRHIYRGQPRRHLLTTGWTSFINKKKLVSGDAVLFLRGSDGKLRLGVRRAVQLKNEA
LLEAVNSTDSKQRTLSAVVSSLENRSIFHISFNPRTGASEFIVPYCKFLETLNCPFSIGM
RFKVGSENEDANQRSCGLISGISEVDSIGWPGSKWRCLQVKWDGDTNCNHQNRVSPWEIE
RVGSSISVPHCLSSSVSKRTKLCFTQGDLDAPILDGNGRPDSLETECLHRVLQGQELVRS
RTHGAACSHSSDTPKCQGSYERRFSDDVWNCKMNDAMSGLRDQNATGFAYQPLGFSESVR
FPEVLQGQEMSRAVPSFLGAAFGARIQNGRIGSFDVQRTAGTQGYPLQQFSLLATEAHSP
SSVLMVNQTTVLQPELQGMANLEQANGSPYAHIATQREAETWPSTQQQRASETGSELFNT
AEASAPAAVAKSGLADKGVRRSSCRLFGFSLTDEILVAEEDGGKENYEAPQTPRVLDLFG
HSQSTPSALPLHALCAAPLGI
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggggatcgatctcaacgccgtggaggaggacgagccggcgggggcggtgtgcggggag
ctgtggcacgcgtgcgcgggggcgggggtggcgctgccgcggcggggcagcgccgtcgtg
tacctgccgcaggcgcacctcgcggcgggcggctgcggcgacggcatggaggtgccggcc
ggtcccgcggcgcgcgtgccgccgcacgtggcgtgccgcgtcgtcgacgtcgacctacgc
gcggatgcggcgacggacgaggtgtacgcgcggctcgcgctggtggcggagggcaagatg
tttgaccaagatattcatgatgctgaaattgaagagaagaactgtgagatggaggatggt
gatggagaaaagaagctaagaacgtcgcacatgttctgcaagacactcacagcttctgat
acaagcacacatggagggttttctgttcctcggcgggctgctgaggattgctttccacca
ttggactatgaccagcttaggccatctcaagagctcattgccaaggatttacacggcatg
aaatggaggttccgacatatctatagaggtcaaccacgtaggcatcttctgacaactgga
tggacttcatttatcaataagaagaaattagtctcaggggatgcggtcttgtttcttaga
ggtagtgatggcaagctaagattgggtgtgaggagagcagttcaactgaaaaatgaagct
cttcttgaagctgtcaatagtactgattcaaagcaacgtacactgtctgctgtggtcagt
tccttggagaacagaagtatatttcacatttctttcaacccaaggactggtgcttcagaa
tttattgtgccgtattgcaaattcttggagaccttgaattgtcccttttcgattggaatg
aggtttaaagttggcagcgagaatgaagatgctaaccagaggtcttgtggattgatctca
ggtattagtgaagttgattccataggctggcctggatcaaaatggagatgtctccaggtc
aaatgggatggtgatactaattgcaaccaccagaatagagtatctccatgggagatcgag
agagttggcagctcaatttcagttcctcattgtctttcatcatctgtttcaaagcgaaca
aaattgtgctttactcaaggtgatttggacgctccgattctagatggaaatggtcgtcct
gactctttggaaactgaatgtttgcaccgggtcttgcaaggtcaagaattggtgcgctcc
aggactcacggtgctgcatgctctcattcatcagatacccccaaatgtcaaggctcgtat
gaaaggagattctctgatgatgtgtggaactgcaagatgaatgatgcaatgagtgggctc
cgggaccaaaatgccactgggtttgcttaccagcccctaggcttcagtgaatctgttaga
ttcccagaggtcttgcaaggtcaagaaatgtctcgggcggttccttccttccttggagct
gctttcggtgctcgcatacagaatggcagaattggctcgtttgatgtgcagagaacagct
ggaactcaaggatatcccctccagcagttcagtctgctagcaacagaagcgcattcaccc
tcttctgttcttatggttaaccaaaccacggtgctacagcctgagctacaaggtatggcc
aaccttgaacaagcaaatggcagcccgtacgcccacatcgcaacgcagagagaagctgaa
acctggccatctacgcagcagcaaagggcaagtgaaactggaagcgagcttttcaacaca
gctgaagcctcagcacctgctgctgttgctaaatctggattagctgacaagggagttagg
cgaagcagctgcaggcttttcggtttctccttgaccgacgagatcctggtggcagaggaa
gatggcgggaaggaaaactacgaagctccgcaaactcccagggttctggacttgtttgga
cacagccaatctacacccagtgctctgcctctacatgctctctgcgctgctcccttggga
atttga
DBGET
integrated database retrieval system
