KEGG   Panicum virgatum (switchgrass): 120664970
Entry
120664970         CDS       T07260                                 
Name
(RefSeq) calreticulin isoform X1
  KO
K08057  calreticulin
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04141  Protein processing in endoplasmic reticulum
pvir04145  Phagosome
pvir04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    120664970
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120664970
   04148 Efferocytosis
    120664970
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:pvir03110]
    120664970
  09183 Protein families: signaling and cellular processes
   04091 Lectins [BR:pvir04091]
    120664970
Chaperones and folding catalysts [BR:pvir03110]
 Other chaperones and cochaperones
  Calnexin / calreticulin
   120664970
Lectins [BR:pvir04091]
 L-type lectins
  120664970
SSDB
Motif
Pfam: Calreticulin Neural_ProG_Cyt
Other DBs
NCBI-GeneID: 120664970
NCBI-ProteinID: XP_039800306
LinkDB
Position
3N:complement(20259535..20263503)
AA seq 419 aa
MAIRGGSSFALAALLALASVAAVAGEVFFQEKFEDGWESRWVKSDWKKDENMAGEWNHTS
GKWNGDAEDKGIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLG
GDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTKDGKNHLIKKDVPCETDQLTHVYTL
IIRPDATYSILIDNEEKQTGSVYEHWDILPPKKIKDPEAKKPEDWDDKEYIPDPEDKKPE
GYDDIPKEIPDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKQKKIKNPNYQGKWKAPM
IDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKKFAEDTWAKHKEA
EKAAFDEAEKKKEEEEAAKAGEDDDDLEDEEDDEKADEDKADSDAEDGKDSDDEKHDEL
NT seq 1260 nt   +upstreamnt  +downstreamnt
atggcgattcgcggggggtcttcgtttgccctcgcggcactgctcgcgctcgcctctgtc
gccgccgtcgctggcgaggtcttcttccaggagaagttcgaagatggctgggaaagtcgg
tgggtcaagtccgactggaagaaggatgagaacatggctggtgaatggaaccacacctct
gggaaatggaatggagatgctgaggacaaaggtatccagacctctgaggactacaggttc
tatgccatttcggcggagtaccctgagttcagcaacaaggataagaccctggtgctgcag
ttctcagtgaagcacgagcagaagctggactgtggtggtggttatgtaaagttgcttggc
ggtgatgtggaccagaagaaattcggtggcgacacaccttacagcattatgtttggacca
gatatctgtggatacagcaccaagaaggttcatgctatcctgacaaaggatggcaagaac
cacctgatcaagaaggatgtgccttgcgagactgaccagttgacacatgtgtacactttg
ataatccgccctgatgcgacatacagcattctcattgacaatgaagagaagcaaacaggc
agcgtctacgagcactgggacattcttcccccaaagaaaatcaaggacccagaggctaag
aagcctgaagactgggatgacaaggagtacattcctgaccccgaggacaagaagccagag
ggctatgatgacattcccaaggaaattccggaccctgatgctaagaagcctgaggactgg
gatgatgaggaagatggtgaatggactgcccctaccattcccaacccagaatacaaggga
ccatggaagcaaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatg
attgacaaccccgatttcaaggatgatccatacatttatgcttttgacagcctcaagtac
attggcattgagctgtggcaggttaaatcaggtactttgtttgacaacatcatcatcact
gacgaccctgcattggctaagaaatttgcagaggatacctgggccaagcacaaggaggct
gagaaggctgcttttgacgaggctgagaagaagaaggaagaggaggaagctgccaaggct
ggtgaggacgatgatgacctagaggatgaggaagatgatgagaaggcagacgaggacaaa
gctgactctgatgctgaggatggcaaggattctgatgatgagaagcacgacgagctctag

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