Panicum virgatum (switchgrass): 120664970
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Entry
120664970 CDS
T07260
Name
(RefSeq) calreticulin isoform X1
KO
K08057
calreticulin
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04141
Protein processing in endoplasmic reticulum
pvir04145
Phagosome
pvir04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120664970
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120664970
04148 Efferocytosis
120664970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120664970
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
pvir04091
]
120664970
Chaperones and folding catalysts [BR:
pvir03110
]
Other chaperones and cochaperones
Calnexin / calreticulin
120664970
Lectins [BR:
pvir04091
]
L-type lectins
120664970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calreticulin
Neural_ProG_Cyt
Motif
Other DBs
NCBI-GeneID:
120664970
NCBI-ProteinID:
XP_039800306
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All DBs
Position
3N:complement(20259535..20263503)
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AA seq
419 aa
AA seq
DB search
MAIRGGSSFALAALLALASVAAVAGEVFFQEKFEDGWESRWVKSDWKKDENMAGEWNHTS
GKWNGDAEDKGIQTSEDYRFYAISAEYPEFSNKDKTLVLQFSVKHEQKLDCGGGYVKLLG
GDVDQKKFGGDTPYSIMFGPDICGYSTKKVHAILTKDGKNHLIKKDVPCETDQLTHVYTL
IIRPDATYSILIDNEEKQTGSVYEHWDILPPKKIKDPEAKKPEDWDDKEYIPDPEDKKPE
GYDDIPKEIPDPDAKKPEDWDDEEDGEWTAPTIPNPEYKGPWKQKKIKNPNYQGKWKAPM
IDNPDFKDDPYIYAFDSLKYIGIELWQVKSGTLFDNIIITDDPALAKKFAEDTWAKHKEA
EKAAFDEAEKKKEEEEAAKAGEDDDDLEDEEDDEKADEDKADSDAEDGKDSDDEKHDEL
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atggcgattcgcggggggtcttcgtttgccctcgcggcactgctcgcgctcgcctctgtc
gccgccgtcgctggcgaggtcttcttccaggagaagttcgaagatggctgggaaagtcgg
tgggtcaagtccgactggaagaaggatgagaacatggctggtgaatggaaccacacctct
gggaaatggaatggagatgctgaggacaaaggtatccagacctctgaggactacaggttc
tatgccatttcggcggagtaccctgagttcagcaacaaggataagaccctggtgctgcag
ttctcagtgaagcacgagcagaagctggactgtggtggtggttatgtaaagttgcttggc
ggtgatgtggaccagaagaaattcggtggcgacacaccttacagcattatgtttggacca
gatatctgtggatacagcaccaagaaggttcatgctatcctgacaaaggatggcaagaac
cacctgatcaagaaggatgtgccttgcgagactgaccagttgacacatgtgtacactttg
ataatccgccctgatgcgacatacagcattctcattgacaatgaagagaagcaaacaggc
agcgtctacgagcactgggacattcttcccccaaagaaaatcaaggacccagaggctaag
aagcctgaagactgggatgacaaggagtacattcctgaccccgaggacaagaagccagag
ggctatgatgacattcccaaggaaattccggaccctgatgctaagaagcctgaggactgg
gatgatgaggaagatggtgaatggactgcccctaccattcccaacccagaatacaaggga
ccatggaagcaaaagaaaatcaagaacccgaactaccagggtaaatggaaggcacctatg
attgacaaccccgatttcaaggatgatccatacatttatgcttttgacagcctcaagtac
attggcattgagctgtggcaggttaaatcaggtactttgtttgacaacatcatcatcact
gacgaccctgcattggctaagaaatttgcagaggatacctgggccaagcacaaggaggct
gagaaggctgcttttgacgaggctgagaagaagaaggaagaggaggaagctgccaaggct
ggtgaggacgatgatgacctagaggatgaggaagatgatgagaaggcagacgaggacaaa
gctgactctgatgctgaggatggcaaggattctgatgatgagaagcacgacgagctctag
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