KEGG   Panicum virgatum (switchgrass): 120664979
Entry
120664979         CDS       T07260                                 
Name
(RefSeq) signal recognition particle 54 kDa protein 2-like
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir03060  Protein export
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    120664979
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:pvir02044]
    120664979
Enzymes [BR:pvir01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     120664979
Secretion system [BR:pvir02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   120664979
  Eukaryotic Sec-SRP protein
   120664979
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW ResIII Zeta_toxin Fe-ADH AAA_17 AAA_22 AAA_33 AAA_16 nSTAND3 DO-GTPase2 MMR_HSR1 ATP_bind_1 AAA_19 AAA_30 APS_kinase TPP_enzyme_N nSTAND_NTPase5 NPHP3_N vWA-TerF-like DUF373
Other DBs
NCBI-GeneID: 120664979
NCBI-ProteinID: XP_039800319
LinkDB
Position
3N:20354729..20357598
AA seq 476 aa
MVLAQLGGSIARALARMKGATVVDEKVLAECLNEISRALLQADVRFETVHDVKANIKSIV
NLDALAAGTDKRRIIQKAVVGELCRMLDPGKPAFTPSKGKPSVVMFVGLQGSGKTTTCTK
YADYYRRKGFSPALVCADTFRAGAFDQLKQNASKAKIPFYGSYNESDPVKIAVEGVDRFR
KEKCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDGSIGQAAFDQAQAFKQSA
SVGAVIVTKMDGHAKGGGALSAVAATRSPVIFIGTGEHIPDFEVFDVKPFVSRLLGMGDL
SGLMDKIQNVMPADELVPNLTAAFTLRLLYQMFQNFQNMGPLGQLFSMIPGLSAQFIEKG
KEKEGQAKIKRYMTIMDSMTEKELDNTNPKLMNESRINRIARGSGRLVKEVVDMLEEHKR
IAKMWSKLPIHNLIRNKRDSLKPLVNALPPNMLNQLGGLNGLQNMMKQMGSQKKMS
NT seq 1431 nt   +upstreamnt  +downstreamnt
atggtgctcgcgcagctgggcgggagcatcgcccgcgcgctggcgcggatgaagggcgcg
accgtcgtggacgagaaggtgctcgcggagtgcctcaacgagatctcgcgcgcgctcctg
caggccgacgtccgcttcgagacggtgcacgacgtcaaggccaacatcaagagcatcgtc
aacctcgacgcgctcgccgcgggcaccgacaagcgccgcatcatacagaaggccgtcgtc
ggtgagctatgcagaatgctggatccagggaagccggccttcacccccagcaaagggaag
cccagcgtggtcatgttcgtcggcttgcagggttctggaaaaaccactacttgtacaaaa
tatgcggattattatcggcgtaaagggtttagtccagcacttgtttgtgccgatacgttc
cgagctggtgcttttgatcagttgaaacagaatgcatcaaaagccaagataccgttctat
ggaagctacaacgaatcagatcctgtgaaaattgctgttgagggtgtggatagattcagg
aaagaaaagtgtgatctcattattgtagatacaagtggacgccacaagcaggaagctgct
ctctttgaagaaatgcgccaagtttcagaggctacgaaaccagacctagtgatatttgtg
atggatggtagtattggtcaggctgcatttgatcaggcacaagcatttaaacagagtgct
tccgttggtgctgttattgttacaaaaatggatgggcatgcaaaaggcgggggtgcactt
agcgcggttgcagctacaagaagcccagtcatatttattggaactggagagcatattcca
gattttgaagtctttgatgtgaaaccatttgttagtcgcctgttaggcatgggagacttg
tctggcttgatggacaagatccaaaatgttatgccagctgatgaactcgtgccgaatctg
actgcagctttcactctcagacttctgtatcagatgttccagaatttccagaatatgggt
cctcttgggcagctcttttctatgatacctggtcttagtgcccagtttattgaaaaagga
aaggaaaaggaaggtcaagcaaagattaagcggtacatgacgatcatggactccatgact
gaaaaagaacttgacaacacgaacccaaagttgatgaacgagtcgcggatcaaccgcatc
gctcgtggatctggcagactcgtgaaggaagtggtggacatgctggaggagcacaagcga
attgccaaaatgtggagcaaattgccgatccacaacctcatcaggaacaaacgtgactca
ttaaagccgttagtcaatgcgcttcctccaaatatgctgaatcagctgggtggcctaaat
ggcctgcagaatatgatgaaacagatgggttctcaaaaaaagatgagctga

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