Panicum virgatum (switchgrass): 120665004
Help
Entry
120665004 CDS
T07260
Name
(RefSeq) H/ACA ribonucleoprotein complex non-core subunit NAF1-like isoform X1
KO
K14763
H/ACA ribonucleoprotein complex non-core subunit NAF1
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pvir03009
]
120665004
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
120665004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Gar1
BUD22
DDHD
Motif
Other DBs
NCBI-GeneID:
120665004
NCBI-ProteinID:
XP_039800350
LinkDB
All DBs
Position
3N:20805031..20812902
Genome browser
AA seq
608 aa
AA seq
DB search
MKPEPVQFCGGETGEKAEMVGGGPDVLLAPDQLLASGIGDLAVKEDVSEGAVAMEMAAAP
ADVEINTTATGGKEGQESSEEESESSEEDEESSEASSSSEDEEHGDKKDEESSEASSSSD
EEELEAMELGGAGGNSLEALLEEGELMVGSDEENEVPKGRSKSKHEAEVLPPVPKIEIQL
EPHHQTLPVGTVSAIMGERVIVEGSVQHNPLNEGSVLWITESRTPLGIVDELFGPVKNPY
YLVRYNSEEEVPAGITAGTSVSFVAEFADHILNMKELYAKGYDASADNDNQEDEPEFSDD
EKEAEYERSLRQAKRQTDRQHEPQKHSSDKKRSQPRGGGFQKDMPPRNRDAPTPGQQPHP
RFHSSDMAPAVAENKARSLGPQNASMRAPTMLPPGPMNPAMPSPVHLANQMGGCFINPAQ
QFLPQQPNMVWPGGLPPPPHPNMRLDGAALAASIMQNLLAGANQFHQQMQNQNFGGFPNQ
MPMPFPQFMAQTGMPANQLPFGGGPPVGNSLFGAAPQMPMGQGNFGQPLPHMASGNRQEQ
GPRPGFPDDSPGFTDPAQPHGNGAEHSPPQFSSGQFHQGSSSFRGGRQQRGGRHSSGRGG
GRGGRHRR
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgaagccggagcccgtccagttttgtggcggcgaaaccggagagaaggctgagatggtg
ggcggcggaccggacgtgctgcttgccccggatcagcttctggcgtcggggattggtgat
ttggctgtgaaagaggatgtctcggagggagcagttgctatggagatggctgccgcgcct
gccgatgttgagataaataccacggcgacaggcggcaaggaggggcaggaaagcagcgag
gaagagtcggagagtagcgaggaggatgaggagtcgagcgaggcttcctcaagcagcgag
gatgaagagcatggggacaagaaggatgaggagtcgagtgaagcctcgtcaagcagtgac
gaggaagagctggaagccatggaacttggtggtgctggtggcaatagcttggaggccctc
cttgaggagggtgaattgatggttgggagcgatgaagagaatgaggtaccaaagggccgc
agcaaatccaaacatgaagcagaggtccttcctccagtcccaaagattgaaatacagttg
gagccacatcatcagactcttccagtagggactgtctcagctattatgggtgagagagtg
attgttgaaggatcagtccaacacaatcccctgaatgaaggctcagttctctggataaca
gaaagcaggacgccccttggtattgtcgatgagttgtttggacctgtaaaaaatccttac
tatctggtgcgctacaactctgaggaagaagttcctgcagggatcactgcaggaaccagt
gtctctttcgtagcagagtttgctgatcacatcctgaatatgaaggagctctatgcgaaa
ggttatgatgcatccgcagacaatgacaaccaagaagatgaacctgaattctctgatgat
gagaaggaggctgagtacgaaaggtcactacgccaagcaaaaaggcagactgatagacag
cacgagccacagaagcattctagcgataagaagagatcacagcccagaggtggtggcttc
caaaaggacatgccaccaaggaatcgggatgcaccaacaccaggtcagcagccacatccc
cgttttcactcctcagacatggctcctgcagttgctgaaaataaggcacgctcattgggg
cctcagaacgcttctatgcgtgctccaaccatgctgccacctggcccaatgaatcctgcc
atgccatcaccagttcatcttgcaaatcagatgggtggctgcttcatcaatccagcacag
cagttcttgccccagcagccaaacatggtttggcctggtgggcttcctcctccaccccat
ccgaatatgaggctagacggagctgccctcgctgccagcatcatgcagaacctccttgcc
ggagcaaaccagttccatcaacagatgcagaaccagaacttcgggggtttcccgaaccaa
atgcccatgcccttcccgcaattcatggcccagactggaatgcctgcaaatcagttgcca
ttcggtggtggacccccggtggggaattcactgtttggtgcagcacctcaaatgcctatg
gggcaaggcaactttggccaaccgcttccacacatggcctccgggaataggcaggaacag
ggaccccgtcctggattcccagatgactcaccaggattcacagacccagcacaaccccat
ggaaacggagctgagcattcacctccgcagttcagttctgggcagtttcatcaagggagc
tcgtccttccgtggtggaaggcagcagcgcggtggccggcattcttcaggcagaggtggc
ggccgaggtggccggcatcgtagatag
DBGET
integrated database retrieval system
