Panicum virgatum (switchgrass): 120665122
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Entry
120665122 CDS
T07260
Name
(RefSeq) probable galacturonosyltransferase 7 isoform X1
KO
K13648
alpha-1,4-galacturonosyltransferase [EC:
2.4.1.43
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00520
Amino sugar and nucleotide sugar metabolism
pvir01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
120665122
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
pvir01003
]
120665122
Enzymes [BR:
pvir01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.43 polygalacturonate 4-alpha-galacturonosyltransferase
120665122
Glycosyltransferases [BR:
pvir01003
]
Polysaccharide
Structural polysaccharide
120665122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_8
Glyco_transf_24
Motif
Other DBs
NCBI-GeneID:
120665122
NCBI-ProteinID:
XP_039800499
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Position
3N:22326091..22332180
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AA seq
631 aa
AA seq
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MKGPGTAAGSAAPAGKRRWRCVAAAGAAVALAFFSVVVPLAVLLGLHARFPSMYLVDESA
VSVYDGSEGGSWEPIPTEENDTLQVNNTVKEFVLPTPKEWTNTNGSQSDTVIGNISIHPA
SPIQQDTVLENSSLLNLLQITGTYLRDSFEQGLPGDENGKSCQLEFGSYCLWSVEHEEVM
KDFIVKRLKDQLFVARAYYPSIVKLDGMENLSHEMKQNIQEHGHMLSEAISDADLPELHR
VNMAKMDQTIAAAKSCDAECTNVEKKLTQLLDMTEDEALFHARQSAYLYRLGVQTLPKSL
HCLSMRLTVDYFNASSDMEHSDAEKFGNPAFQHHVIFSTNLLASSMTINSSVINSEESAN
MVFHLMTDGQNFYAFKNWFIRNSYKGATIRVLNFEYLQMKNLGNGIVDQLSPSEEFRITS
NSNALTLNTLTRTEYISMFGHSLFLLPELFTNLKRVIVLEDDTIVQRDLSLLWNLDLKGK
VIGAVQFCQVKFHQLRAYLPDFPYNSSSCIWMSGVSIIDLDEWREHDVTGIHHRILEKLR
HDTEASWRSAALPAGLLAFQNLIHPIEGQWVQFGLGHDYGLAHGAIKKAAILHYNGNMKP
WLELGIHRYKKYWKRYLPRDDVFMMDCNVNP
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcccgggaacggcggccggctccgcggccccggcggggaagaggcggtggcgg
tgcgtggcggcggcgggcgccgcggtggcgctggccttcttctccgtcgtcgtgccgctc
gccgtgctcctcggcctccacgcgcgcttcccctcgatgtacttggttgacgagagcgct
gtgtcggtttatgacggcagcgaaggtggtagttgggagccaattccgacggaggaaaat
gacacattgcaggtcaacaacaccgtgaaggagtttgtgctgcctactccgaaggagtgg
accaatacaaatggcagtcaatccgacacggttattggtaatatctcaattcatccagct
tctcctatccagcaagatacagtattggaaaattcttcgttgctcaatcttttgcagatt
actggcacttatctgagggacagttttgagcaaggtttacctggtgatgagaatggaaaa
tcctgtcagcttgagtttggaagctattgtctttggtctgtagaacatgaggaagtcatg
aaagatttcatagtgaagcgacttaaagatcagctgtttgttgcgagagcttactatcca
agcattgtgaaacttgatggaatggaaaacctttcacatgaaatgaaacaaaatatccaa
gaacatgggcatatgcttagtgaagccatatctgatgctgatcttcctgaacttcataga
gtcaatatggccaagatggatcagacaattgctgcagctaaatcatgtgacgcagaatgc
actaatgttgagaaaaagctgacgcagttgcttgatatgactgaagatgaagctcttttt
catgcaagacagagcgcttatctttacaggcttggagttcagacattgcccaagagcctc
cactgcctttcaatgagattgactgttgattacttcaatgcatcatctgacatggagcat
tcagatgctgaaaagtttggaaatccagcattccaacaccatgtcattttctccaccaac
cttcttgcgtcatccatgactatcaactcaagtgtgataaattctgaggaatcagcaaat
atggttttccatctgatgaccgatggacaaaacttttatgcatttaagaactggttcatc
agaaattcctacaagggagctaccataagagtccttaattttgaatatttgcaaatgaag
aatttgggtaatgggatagttgatcaattatcaccatctgaagagttccgaatcacctcc
aatagcaatgctctaacgttaaacactcttacgaggactgagtatatttcaatgtttggg
cactcccttttcttgcttcctgaattgtttaccaatcttaaaagggtcattgtcttggaa
gacgatactatagtccagagagacttgtcgctcctgtggaaccttgacttaaagggaaaa
gtgattggtgctgtccagttttgtcaagttaaatttcatcaactcagagcatacttgcct
gacttcccctataattctagttcatgcatatggatgtctggagtgagcattattgatctc
gatgaatggagggaacatgatgtcactggaattcatcaccgaattctagagaagctgcga
catgacacagaagcttcctggagatctgcagcactccctgcaggcctgcttgcttttcaa
aatctgatccatcctattgaaggccagtgggttcaattcgggcttggccatgactatgga
ctcgctcatggtgctataaagaaagctgccatattgcactacaatggtaacatgaaaccc
tggttagagcttgggatacaccggtacaaaaaatactggaagaggtacctgccaagggat
gatgtatttatgatggattgcaatgtaaacccatga
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