KEGG   Panicum virgatum (switchgrass): 120665132
Entry
120665132         CDS       T07260                                 
Name
(RefSeq) ras-related protein RABE1d-like
  KO
K07901  Ras-related protein Rab-8A
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    120665132
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pvir04131]
    120665132
   03036 Chromosome and associated proteins [BR:pvir03036]
    120665132
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:pvir04147]
    120665132
   04031 GTP-binding proteins [BR:pvir04031]
    120665132
Membrane trafficking [BR:pvir04131]
 Exocytosis
  Small GTPases and associated proteins
   Rab GTPases
    120665132
 Autophagy
  Other autophagy associated proteins
    120665132
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centrosome associated proteins
    120665132
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   120665132
  Exosomal proteins of other body fluids (saliva and urine)
   120665132
  Exosomal proteins of colorectal cancer cells
   120665132
GTP-binding proteins [BR:pvir04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab8/10/13 [OT]
    120665132
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU RsgA_GTPase MMR_HSR1 Gtr1_RagA FeoB_N AAA_7 AAA_29 MCM SRPRB AAA_22 PduV-EutP AAA_16 AAA_5 EIF_2_alpha AAA_25 ABC_tran
Other DBs
NCBI-GeneID: 120665132
NCBI-ProteinID: XP_039800522
LinkDB
Position
2K:complement(8780384..8784872)
AA seq 215 aa
MAAAPSRSRGDYDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELD
GKRVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASHN
VNKILVGNKVDMDSKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQVFFTIARDIKQRL
TETVATAAEPPTIQISRPDPDQPNPASRWSSCCNT
NT seq 648 nt   +upstreamnt  +downstreamnt
atggcggcggcgccgtcgaggtcccgaggcgactacgaccacctaatcaagctcctgctc
atcggcgacagcggagttgggaagagttgcttgctcctacggttttctgatgacacattc
acaacaagttttatcaccaccattggcattgatttcaaggttaggacagttgagcttgat
ggaaagcgtgtaaaattacaaatctgggatactgctggtcaagaacgtttccggacaatc
accactgcatactatagaggagctatgggcattctgcttgtgtatgatgtcacagacgaa
tcatccttcaataacattagaaattggattcgcaacatagagcagcatgcatcacacaac
gtcaacaagatcttggtgggcaacaaggttgatatggattcaaaacgggtagtgtccaca
gctcaaggtcagaaactcgcagatgaatatggtatcaaattctttgaaacgagtgcaaaa
acaaatcaaaatgtggagcaggtcttctttaccattgcaagggacataaagcaacggttg
actgagaccgttgccactgcggctgagcccccaactattcagatcagcaggccagatccc
gaccagcccaaccctgcctcgcggtggtcatcctgctgtaacacctga

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