Panicum virgatum (switchgrass): 120665217
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Entry
120665217 CDS
T07260
Name
(RefSeq) nuclear transcription factor Y subunit B-like
KO
K08065
nuclear transcription Y subunit beta
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120665217
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Heteromeric CCAAT factors
120665217
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GFIT
Motif
Pfam:
CBFD_NFYB_HMF
Histone
CENP-T_C
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
120665217
NCBI-ProteinID:
XP_039800626
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Position
3N:23517120..23522002
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AA seq
180 aa
AA seq
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MADAPASPGGGGGSHESGSPKGGGGGGGGGVREQDRFLPIANISRIMKKAIPANGKIAKD
AKETVQECVSEFISFITSEASDKCQREKRKTINGDDLLWAMATLGFEDYIEPLKVYLQKY
REMEGDSKLTAKAGDGSIKKDALGHGGASSSATQGMGQQGAYNQGMGYMQPQYHNGDISN
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgcgccagcgagccccgggggcggcggcgggagccacgagagtgggagcccc
aagggcggcggcgggggcggaggcggcggcgtcagggagcaggacaggttcctgcccatc
gccaacatcagccgcatcatgaagaaggccatcccggccaacgggaagatcgccaaggac
gccaaggagaccgtgcaggagtgcgtctccgaattcatctccttcatcaccagcgaggcg
agtgacaagtgccagagggagaagaggaagaccatcaacggggacgacctactgtgggcc
atggccacgctggggttcgaggactacatagaacccctcaaggtgtacctgcagaagtac
agagagatggagggtgatagcaagttaactgcaaaagctggtgatggctctattaaaaag
gatgcccttggccatgggggagcaagtagctcagccacacaagggatgggacaacaagga
gcgtacaaccaaggaatgggttatatgcaacctcagtaccataacggagacatctcaaac
taa
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