Panicum virgatum (switchgrass): 120665245
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Entry
120665245 CDS
T07260
Name
(RefSeq) heat shock 70 kDa protein 4-like
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir03040
Spliceosome
pvir04141
Protein processing in endoplasmic reticulum
pvir04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120665245
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120665245
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
120665245
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pvir01009
]
120665245
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pvir03041
]
120665245
03009 Ribosome biogenesis [BR:
pvir03009
]
120665245
03110 Chaperones and folding catalysts [BR:
pvir03110
]
120665245
04131 Membrane trafficking [BR:
pvir04131
]
120665245
03051 Proteasome [BR:
pvir03051
]
120665245
03029 Mitochondrial biogenesis [BR:
pvir03029
]
120665245
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pvir04147
]
120665245
Protein phosphatases and associated proteins [BR:
pvir01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
120665245
Spliceosome [BR:
pvir03041
]
Complex B
Other components
Prp19 complex
120665245
Complex C
Prp19-CDC5 complex
120665245
Ribosome biogenesis [BR:
pvir03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
120665245
Chaperones and folding catalysts [BR:
pvir03110
]
Heat shock proteins
HSP70 / DNAK
120665245
Membrane trafficking [BR:
pvir04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
120665245
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
120665245
Proteasome [BR:
pvir03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
120665245
Mitochondrial biogenesis [BR:
pvir03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
120665245
Exosome [BR:
pvir04147
]
Exosomal proteins
Proteins found in most exosomes
120665245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Hydantoinase_A
Radial_spoke_3
Motif
Other DBs
NCBI-GeneID:
120665245
NCBI-ProteinID:
XP_039800677
LinkDB
All DBs
Position
3N:23928316..23931465
Genome browser
AA seq
649 aa
AA seq
DB search
MAKGEGPAIGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQ
VAMNPTNTVFDAKRLIGRRFSDPSVQSDMKLWPFKVVAGPGDKPMIVVNYKGEEKQFAAE
EISSMVLTKMKEIAEAYLGSTIKNAVVTVPAYFNDSQRQATKDAGVISGLNVMRIINEPT
AAAIAYGLDKKASSSGEKNVLIFDLGGGTFDVSLLTIEEGIFEVKATAGDTHLGGEDFDN
RMVNHFVQEFKRKHKKDISGNPRALRRLRTACERAKRTLSSTAQTTIEIDSLYEGIDFYT
TITRARFEELNMDLFRKCMEPVEKCLRDAKMDKSTVHDVVLVGGSTRIPKVQQLLQDFFN
GKELCKSINPDEAVAYGAAVQAAILSGEGNEKVQDLLLLDVTPLSLGLETAGGVMTVLIP
RNTTIPTKKEQVFSTYSDNQPGVLIQVYEGERARTKDNNLLGKFELSGIPPAPRGVPQIT
VCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQEAEKYKAEDEEHKKK
VDAKNALENYAYNMRNTIKDDKIASKLGADDKKRIEQAIDGAISWLDSNQLAEADEFEDK
MKELEGICNPIIAKMYQGAGADMGGAAGMDEDVPAGGSSGAGPKIEEVD
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagggggaggggccggcgatcgggatcgacctggggacgacctactcgtgcgtc
ggcgtgtggcagcacgaccgcgtcgagatcatcgccaacgaccaggggaaccgcaccacg
ccgtcctacgtcgccttcaccgacaccgagcggctcatcggcgacgccgccaagaaccag
gtcgccatgaaccccaccaacaccgtcttcgacgcgaagcggttgatcggcaggaggttc
tccgacccgtccgtgcagagtgacatgaagctatggccgttcaaggtcgtggctggccct
ggcgacaagccgatgatcgtggtcaactacaagggcgaggagaagcagttcgctgccgag
gagatctcctccatggtgctgaccaagatgaaggagattgctgaggcctatctcggctcc
accatcaagaacgccgtggtcaccgtccctgcctacttcaacgactcccagaggcaggcc
accaaggacgccggcgtcatctccggcctaaacgtgatgcgcatcatcaacgagcccacc
gccgcggccatcgcctacgggctcgacaagaaggccagcagcagcggcgagaagaacgtg
ctcatcttcgacctcggcggtggcaccttcgatgtgtcgctgctgaccatcgaggagggc
atcttcgaggtcaaggccaccgccggtgacacccatctgggtggggaggacttcgacaac
cgcatggtgaaccatttcgtccaggagttcaagcgcaagcacaagaaggacatcagcggc
aacccgcgcgcgctgcggcgtttgcggacggcctgcgagcgcgccaagcgcacgctgtcg
tccaccgcgcagaccacaatcgagatcgactcgctgtacgagggcatcgacttctacacc
accatcacccgcgcccggttcgaggagctgaacatggacctcttccgcaagtgcatggag
cccgtggagaagtgcctccgcgacgccaagatggacaagagcaccgtgcacgacgtcgtg
ctcgtgggcggctccacccgcatcccaaaggtgcagcagctgctccaggacttcttcaac
ggcaaggagctgtgcaagagcatcaaccccgacgaggccgtggcgtacggcgccgctgtc
caggccgccatcctgagcggcgagggcaacgagaaggtgcaggacctgctcctgctcgac
gtcacgccgctgtccctcggtctggagaccgccggtggcgtcatgaccgtgctgatcccg
cggaacaccaccatccccaccaagaaggagcaggtgttctccacctactcggacaaccag
ccgggtgtgctgatccaggtgtacgagggcgagcgcgccaggaccaaggacaacaacctc
ctgggcaagttcgagctgtctggcatcccgccggcgccccgcggcgtgccccagatcacg
gtgtgcttcgacatcgacgccaacggcatcctgaacgtgtcggcggaggacaagacgacg
gggcagaagaacaagatcaccattaccaacgacaaggggcggctgagcaaggaggagatc
gagaagatggtgcaggaggctgagaagtacaaggcggaggacgaggagcacaagaagaag
gtggacgccaagaacgcgctggagaactacgcctacaacatgcgcaacaccatcaaggac
gacaagatcgcctccaagctgggtgcggacgacaagaagcgcatcgagcaggccatcgac
ggcgccatcagctggctggacagcaaccagctcgcggaggcggacgagttcgaggacaag
atgaaggagctggagggcatctgcaaccccatcatcgccaagatgtaccagggcgccggc
gcggacatgggcggcgcagcgggcatggacgaggacgtgccggccggcggcagcagcggc
gctggccccaagatcgaggaggtcgactaa
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