KEGG   Panicum virgatum (switchgrass): 120665255
Entry
120665255         CDS       T07260                                 
Name
(RefSeq) ATP-dependent zinc metalloprotease FTSH 8, mitochondrial-like
  KO
K08956  AFG3 family protein [EC:3.4.24.-]
Organism
pvir  Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:pvir01002]
    120665255
  09182 Protein families: genetic information processing
   03110 Chaperones and folding catalysts [BR:pvir03110]
    120665255
Peptidases and inhibitors [BR:pvir01002]
 Metallo peptidases
  Family M41: FtsH endopeptidase family
   120665255
Chaperones and folding catalysts [BR:pvir03110]
 Other chaperones and cochaperones
  AAA proteases
   120665255
SSDB
Motif
Pfam: Peptidase_M41 AAA AAA_lid_3 FtsH_ext AAA_5 RuvB_N TIP49 AAA_22 AAA_2 AAA_33 AAA_16 IstB_IS21 Mg_chelatase AAA_17 LonB_AAA-LID
Other DBs
NCBI-GeneID: 120665255
NCBI-ProteinID: XP_039800699
LinkDB
Position
3N:complement(24114547..24120144)
AA seq 821 aa
MTLASLARAVGRSARSSRPRQGFQLGGLGGARSPPAPPLPPPPVHGGEGGGLGFVRGYLT
AASAADLARPAAGKAVDWRCLLASPQFRRLFSDESKKNYENYYPKGKKEEVPKGDGSKKS
ESKQESNTDERWNFQESAMKHLQNFLAPLLILGLMLTSMSSGTAEQKEISFQEFKNKLLE
PGLVDRIVVSNKSVAKVYIRNSPQPKSQGQNRDTHISTTDVPGKPAPSRCKYYFNIGSVD
SFEEKLEEAQEAMGIDPHDFVPVTYVAEVNWFQEVMRFAPTAFLVGLIYLMGKRMQSGFS
IGGGPGKGRGGIFNIGKATVTKMDKNSKNKVFFKDVAGCDEAKQEIMEFVHFLKNPKKYE
ELGAKIPKGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRNLFQ
EARQCAPSIVFIDEIDAIGRARGRGGFSGSNDERESTLNQLLVEMDGFGTTSGVVVLAGT
NRPDILDKALLRPGRFDRQITIDKPDIKGRDQIFRIYLKKLKLDNEPSFYSQRLAALTPG
FAGADIANVCNEAALIAARSEQTQITMQHFESAIDRIIGGLEKKNKVISKLERRTVAYHE
SGHAVAGWFLEHAEHLLKVTIVPRGTAALGFAQYVPNENLLMTKEQLFDMTCMTLGGRAA
EQVLIGKISTGAQNDLEKVTKMTYAQVAVYGFSEKVGLLSFPQRDDGFEMTKPYSNQTAS
IIDDEVREWVGKAYKRTVELITEHKEQVAQIAELLLEKEVLHQDDLTRVLGERPFKAAEP
TNYDVFKQGFQDDDDKSQAPAKNAELPDDDASPSLGEVVPT
NT seq 2466 nt   +upstreamnt  +downstreamnt
atgacgctcgcctccctcgcccgcgccgtcggcaggtccgcgcgctcctcccgcccgcgc
cagggtttccagctcgggggcctcggcggggcccggtcgccgcccgcgccgccgctgccg
ccgccgccggtccatggcggggagggcggcgggttaggatttgtccgggggtacctgacc
gcggcgtcggcggcggatcttgcgaggcccgccgcgggcaaggccgtggattggagatgc
ctcctcgccagcccgcagttccggcggctcttctcggacgagtccaagaagaattacgag
aactactaccctaagggtaagaaggaggaggtgccaaaaggagatgggagtaaaaagtct
gaatcgaagcaggaatctaatacagacgagagatggaatttccaggagagtgctatgaaa
catctgcagaatttccttgcgcctctattaattcttggcctgatgctcacatccatgtcg
tctggcacggcagaacagaaggagataagcttccaagagttcaagaacaagctactagaa
cctggtttagttgatcgcattgttgtttcaaataaatcagtggcaaaggtttatatcagg
aattcaccacagccaaagagccaaggtcaaaatagagatacccatatttctaccactgat
gttccaggcaagcctgctcctagcagatgcaagtattacttcaatattggtagtgttgat
tcctttgaagagaagttagaggaagcccaggaagcgatgggaatagatccacatgatttt
gtcccagtaacttatgttgctgaagtaaattggttccaagaagttatgaggtttgcccca
acagcatttcttgttggattgatatatttgatggggaaaaggatgcagagtggtttcagc
attggaggtggtcctgggaagggaagaggtggtattttcaacattggaaaagctactgtg
acaaagatggacaaaaattccaaaaataaggtgttttttaaggatgtagctggttgtgat
gaagctaaacaagaaataatggagtttgtgcatttccttaaaaaccccaagaagtatgaa
gagttgggagctaaaatacccaaaggtgctctgcttgtaggccctcctgggacagggaag
actcttcttgccaaagctactgcaggagagtctggtgtgccctttttgtctatttctggt
tcagatttcatggaaatgtttgttggtgttggaccatccagggtacggaacttgttccaa
gaagctcgacagtgtgctcctagtattgtatttattgatgaaattgatgctattggtcgt
gcaagaggacgtggaggtttttcaggctcaaatgatgaacgtgagagtactttgaaccag
ctgcttgtagaaatggatggatttggaacaacttctggtgtcgttgttcttgctgggaca
aataggcctgacatcctggataaggcattgttgaggccaggaaggtttgatcgccagata
acaatcgacaagccagatataaagggtcgtgatcaaatattccgcatctatcttaaaaag
cttaagctggacaatgaaccttcattttattcgcaaaggctagctgctttgacacctggg
tttgctggagctgacattgccaacgtttgtaatgaagctgctttaattgctgcaagaagc
gagcaaactcagattacaatgcagcattttgagtctgcaatcgataggattattggtggt
ttggagaagaaaaataaggtcattagtaaactggagcgacgtactgttgcttaccatgaa
tctgggcatgctgttgctggatggttcttggagcatgcagagcatcttctaaaagttacc
attgttcctcgtggaacagctgcattaggctttgcacagtacgtcccaaatgaaaatctt
ttgatgacaaaagagcagctttttgatatgacgtgcatgacattgggtggccgtgctgca
gaacaggttttgattggcaaaatctcaactggtgctcagaatgacctggagaaagttacc
aaaatgacctatgcacaggttgccgtgtatggttttagtgaaaaggttgggcttctatcc
ttccctcagagggatgatggcttcgaaatgaccaaaccttacagcaaccaaactgcatcc
ataattgacgatgaggtcagggaatgggttggcaaggcctataagagaacggttgaactg
ataacggagcacaaggagcaagtagcccaaattgcagaattgctgctcgagaaggaagtc
ctccaccaggacgatctgaccagggtactgggagaacgccctttcaaggcagcagaacca
accaactatgacgtctttaagcaggggttccaggatgatgatgacaagagccaagcacca
gcaaagaatgccgagttgcctgatgatgatgcatctccctcgcttggcgaggttgtaccc
acgtag

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