Panicum virgatum (switchgrass): 120665274
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Entry
120665274 CDS
T07260
Name
(RefSeq) probable ribose-5-phosphate isomerase 2
KO
K01807
ribose 5-phosphate isomerase A [EC:
5.3.1.6
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00030
Pentose phosphate pathway
pvir00710
Carbon fixation by Calvin cycle
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
pvir01200
Carbon metabolism
pvir01230
Biosynthesis of amino acids
Module
pvir_M00004
Pentose phosphate pathway (Pentose phosphate cycle)
pvir_M00007
Pentose phosphate pathway, non-oxidative phase, fructose-6P => ribose-5P
pvir_M00165
Reductive pentose phosphate cycle (Calvin cycle)
pvir_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
120665274
09102 Energy metabolism
00710 Carbon fixation by Calvin cycle
120665274
Enzymes [BR:
pvir01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.6 ribose-5-phosphate isomerase
120665274
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Gene cluster
GFIT
Motif
Pfam:
Rib_5-P_isom_A
DeoRC
Motif
Other DBs
NCBI-GeneID:
120665274
NCBI-ProteinID:
XP_039800729
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Position
3N:complement(24259561..24260774)
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AA seq
283 aa
AA seq
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MGSAATSPPPSMKLAQEDLKRVAAHMGDAAASPPPPVKLTQEDLKRVAAHRAVEFVEPGM
ALGLGTGSTAAHALDRLGDLIRAGALPGVAGVPTSLKTELHATRVGIPLLPLGGDRGPAR
IHLSIDGADEVDPDLNLVKGRGGSLLREKMIEGAGEKFVVIVDESKLVPRLGCTGAVPVE
VIPFGAPHTLGLIRKVFDGLPGFHARLRMVKKDADEDTPFTTDNGNYIVEMFFEDGIRGD
LHNISDQLLRITGVVEHGMFLSMATSVIVANKDGTITVMDKKN
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgggcagcgccgccacctcgccgccgccgtccatgaagctggcgcaggaggacttgaag
cgcgtggcggcgcacatgggcgacgccgccgcctcgccgccgccgcccgtgaagctgaca
caggaggacctgaagcgcgtggcggcgcaccgcgcggtggagttcgtggagcccggcatg
gcgctgggactcggcacgggttccacggcggcgcacgcgctggaccgcctgggcgacctc
atccgcgcgggcgcgctgccgggcgtggcgggcgtgcccacctccctcaagacagagctc
cacgcgacccgcgtcgggatcccgctcctcccgctcgggggcgaccgcgggcccgccagg
atccacctctccatcgacggcgccgacgaggtggacccggacctcaacctagtcaagggc
cgcggcggctctttgctccgggagaagatgatcgagggggctggggagaaattcgttgtc
atcgtcgacgagtccaagctggtgccccgcctcgggtgtacgggcgcggtgcccgtcgag
gtcatccccttcggcgctccccacacgctgggcctcatccgcaaggtgttcgatggattg
cctggcttccacgccaggctcaggatggtcaagaaagatgccgatgaagacacgccgttc
acgactgacaacggcaactacatcgtggagatgttcttcgaggacggcatccgcggcgac
ctccacaacatcagcgaccaactccttcggatcacgggtgttgttgagcatggcatgttc
ctcagcatggccacctctgtcatcgtcgccaacaaggatggcaccatcactgtgatggac
aaaaagaattaa
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