Panicum virgatum (switchgrass): 120665424
Help
Entry
120665424 CDS
T07260
Name
(RefSeq) MADS-box transcription factor 4-like
KO
K09264
MADS-box transcription factor, plant
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pvir03000
]
120665424
Transcription factors [BR:
pvir03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Homeotic genes
120665424
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
K-box
HALZ
APG6_N
DivIC
Motif
Other DBs
NCBI-GeneID:
120665424
NCBI-ProteinID:
XP_039800921
LinkDB
All DBs
Position
3N:complement(26747667..26750024)
Genome browser
AA seq
215 aa
AA seq
DB search
MGRGKIEIKRIENSTNRQVTFSKRRAGLVKKAREIGVLCDAEVGVVIFSSGGKLYDYCSP
RTSLSRILEKYQTNSGKILWDEKHKSLSAEIDRVKKENDNMQIELRHLKGEDLNSLPPTE
LIAIEEALQNGQTNQRDKLMDHWRMHKRNGKMLEDEHKMLSFRMAYQHQQEAELSGGMRE
LEIGYHQVQHDRDFTSQMPFTFRVQPSHPNLQEDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atggggcgcggcaagatcgagatcaagaggatcgagaactccaccaaccgccaggtgacc
ttctccaagcgccgggccgggctcgtcaagaaggcccgcgagatcggcgtgctctgcgac
gccgaggtcggcgtcgtcatcttctccagcggcggcaagctctacgactactgctcgccc
aggacctcgctatccaggatcttggagaagtaccagaccaactccgggaagatattgtgg
gatgagaagcacaagagcctaagtgcagagatcgacagggtcaagaaggagaacgacaac
atgcagattgagctcaggcatctgaaaggcgaggatctgaactccctgccgcccacggag
ctgatcgccatcgaggaggcgctccagaacgggcagaccaaccagcgcgacaagctgatg
gaccactggaggatgcacaagaggaacgggaagatgctggaggacgagcacaagatgctg
tcctttaggatggcctaccagcaccaacaggaagccgagctcagcggaggcatgagggag
ttggagattgggtaccaccaggtccagcatgacagggatttcacttcgcagatgccgttc
accttccgggtgcagcccagccaccccaacttgcaggaagacgagtag
DBGET
integrated database retrieval system
