Panicum virgatum (switchgrass): 120665470
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Entry
120665470 CDS
T07260
Name
(RefSeq) isopentenyl-diphosphate Delta-isomerase I-like
KO
K01823
isopentenyl-diphosphate Delta-isomerase [EC:
5.3.3.2
]
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir00900
Terpenoid backbone biosynthesis
pvir01100
Metabolic pathways
pvir01110
Biosynthesis of secondary metabolites
Module
pvir_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
pvir_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
pvir_M00366
C10-C20 isoprenoid biosynthesis, plants
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
120665470
Enzymes [BR:
pvir01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.2 isopentenyl-diphosphate Delta-isomerase
120665470
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-GeneID:
120665470
NCBI-ProteinID:
XP_039800978
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All DBs
Position
3N:complement(27464859..27469136)
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AA seq
299 aa
AA seq
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MAVAPAARPTFALLASASASLGAGRRACARLAVSSSSSAGPALPRLRGRRAFAAAAGGAV
MGKAGPGSVEADAGMDAVQRRLMFEDECILVDEQDKVVGHESKYNCHLMEKIENGHALHR
AFSVFLFNSKYELLLQQRSATKVTFPLVWTNTCCSHPLYRESELIEENCAGVRNAAQRKL
FDELGIVADELPLDEFIPLGRMLYKAPSDGKWGEHELDYLLFMVRDVKLNPNPEEVADVR
YMNRDQLKELLRKADAGEDGVKLSPWFRLVVDNFLMGWWDHVEQGTLEEAADMKTIHKL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atggcagtggcaccggcggcgcgtcccaccttcgcgctcctcgcctccgcctcggcgtcg
ctcggggccgggcgccgcgcgtgcgctcgcctggccgtctcctcctcctcctcggcgggg
ccggcgctccccaggctccgcgggcgccgcgcgttcgccgccgcggccgggggcgccgtg
atggggaaggccggacccggctccgtcgaagccgacgcggggatggacgccgtgcagcgg
cggctcatgttcgaggacgagtgcattttagttgatgaacaggacaaggtcgttggccac
gagtccaagtataactgccatctcatggaaaagatagaaaatggacatgccctacacaga
gctttcagtgttttccttttcaactccaaatatgagttgctacttcagcaaaggtctgca
acaaaagtgacatttccacttgtatggacaaatacttgttgtagccatcctctctaccgt
gagtcagagttgattgaggaaaattgtgcaggggtgagaaatgcagcccagcgcaagcta
tttgatgaattgggaatagtggctgatgaattaccgctcgacgagttcattcctctcggg
aggatgctttataaggctccttcagatggaaaatggggcgaacatgagttggattacctg
ctgttcatggttcgtgacgtgaagctcaacccaaatcctgaagaagttgcggacgtcagg
tacatgaaccgggatcagctgaaggagctgctgaggaaagcagatgctggggaggatggt
gttaagctgtccccttggttcaggctggtggtggataacttccttatgggctggtgggat
catgttgagcaagggaccctcgaggaggccgctgacatgaaaaccatccataagttgtag
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