KEGG   Panicum virgatum (switchgrass): 120665471
Entry
120665471         CDS       T07260                                 
Name
(RefSeq) tubulin beta-2 chain-like
  KO
K07375  tubulin beta
Organism
pvir  Panicum virgatum (switchgrass)
Pathway
pvir04145  Phagosome
pvir04517  IgSF CAM signaling
pvir04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:pvir00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04517 IgSF CAM signaling
    120665471
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    120665471
  09142 Cell motility
   04814 Motor proteins
    120665471
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:pvir03036]
    120665471
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:pvir04812]
    120665471
   04147 Exosome [BR:pvir04147]
    120665471
Chromosome and associated proteins [BR:pvir03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     120665471
Cytoskeleton proteins [BR:pvir04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    120665471
Exosome [BR:pvir04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   120665471
  Exosomal proteins of colorectal cancer cells
   120665471
  Exosomal proteins of bladder cancer cells
   120665471
SSDB
Motif
Pfam: Tubulin Tubulin_C Tubulin_3 Misat_Tub_SegII Tubulin_2
Other DBs
NCBI-GeneID: 120665471
NCBI-ProteinID: XP_039800979
LinkDB
Position
3N:complement(27485461..27488812)
AA seq 446 aa
MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERANVYYSEASCGRYV
PRAVLMDLEPGTMDAVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKSSSYFVEWIPNNVKSSVCDIAPRG
LSMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAECNMNDLVS
EYQQYQDATADEEADYEDEEAAAAAE
NT seq 1341 nt   +upstreamnt  +downstreamnt
atgagggagatcctgcacatccagggcgggcagtgcgggaaccagatcggctccaagttc
tgggaggtggtgtgcgacgagcacggcatcgacccgacggggcggtacgtggggacgtcg
gacctgcagctggagcgcgccaacgtctactacagcgaggcgtcgtgcggccgctacgtg
ccgcgcgccgtgctcatggacctggagcccggcaccatggacgccgtccgcacggggccc
tacggccagatcttccgccccgacaacttcgtcttcggccagtccggcgccggcaacaac
tgggccaagggccactacaccgagggcgctgagctcatcgactccgtcctcgacgtcgtc
cgcaaggaggccgagaactgcgactgcctccagggtttccaggtctgccactcactgggc
ggaggcacgggctccggcatgggcaccctgctcatctccaagatcagggaggagttcccg
gaccggatgatgctgaccttctccgtcttcccgtcccccaaagtgtctgacacggtggtc
gagccctacaacgccacgctctcggtccaccagctcgtggagaacgccgacgagtgcatg
gtgctggacaacgaggcgctttacgacatctgcttccgcacactgaagctaaccactcct
agctttggtgatctgaaccacctgatcagtgccaccatgagtggtgtcacctgctgcctt
cgcttcccagggcagctgaactccgatctccgcaagcttgctgtcaacctgatccccttc
ccgcgcctgcacttcttcatggttggcttcgcgccactcacctcgcgtggctcccagcag
taccgctccctcaccgtccccgagctgacccaacagatgtgggactccaagaacatgatg
tgcgctgcggacccacgccacggccgctaccttactgcctccgccatgttccggggcaag
atgagcaccaaggaggtggacgagcagatgatcaatgtccagaataagagctcatcctac
ttcgtggaatggatccctaacaacgtcaagtcgagcgtgtgcgacatcgctccgcgtggc
ctctccatgtcctccacctttgttggcaactccacctcgatccaggagatgttccggcgg
gtgagcgagcagttcacggccatgttcaggaggaaggccttcttgcattggtacactggt
gagggcatggacgagatggagtttaccgaggcggagtgcaacatgaacgaccttgtctcc
gagtaccagcagtaccaggatgcgaccgccgacgaggaggctgattatgaggatgaggag
gctgcggctgcggcggagtga

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