Panicum virgatum (switchgrass): 120665471
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Entry
120665471 CDS
T07260
Name
(RefSeq) tubulin beta-2 chain-like
KO
K07375
tubulin beta
Organism
pvir
Panicum virgatum (switchgrass)
Pathway
pvir04145
Phagosome
pvir04517
IgSF CAM signaling
pvir04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120665471
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
120665471
09142 Cell motility
04814 Motor proteins
120665471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pvir03036
]
120665471
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pvir04812
]
120665471
04147 Exosome [BR:
pvir04147
]
120665471
Chromosome and associated proteins [BR:
pvir03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
120665471
Cytoskeleton proteins [BR:
pvir04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
120665471
Exosome [BR:
pvir04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120665471
Exosomal proteins of colorectal cancer cells
120665471
Exosomal proteins of bladder cancer cells
120665471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
Misat_Tub_SegII
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
120665471
NCBI-ProteinID:
XP_039800979
LinkDB
All DBs
Position
3N:complement(27485461..27488812)
Genome browser
AA seq
446 aa
AA seq
DB search
MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTGRYVGTSDLQLERANVYYSEASCGRYV
PRAVLMDLEPGTMDAVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVV
RKEAENCDCLQGFQVCHSLGGGTGSGMGTLLISKIREEFPDRMMLTFSVFPSPKVSDTVV
EPYNATLSVHQLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCL
RFPGQLNSDLRKLAVNLIPFPRLHFFMVGFAPLTSRGSQQYRSLTVPELTQQMWDSKNMM
CAADPRHGRYLTASAMFRGKMSTKEVDEQMINVQNKSSSYFVEWIPNNVKSSVCDIAPRG
LSMSSTFVGNSTSIQEMFRRVSEQFTAMFRRKAFLHWYTGEGMDEMEFTEAECNMNDLVS
EYQQYQDATADEEADYEDEEAAAAAE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgagggagatcctgcacatccagggcgggcagtgcgggaaccagatcggctccaagttc
tgggaggtggtgtgcgacgagcacggcatcgacccgacggggcggtacgtggggacgtcg
gacctgcagctggagcgcgccaacgtctactacagcgaggcgtcgtgcggccgctacgtg
ccgcgcgccgtgctcatggacctggagcccggcaccatggacgccgtccgcacggggccc
tacggccagatcttccgccccgacaacttcgtcttcggccagtccggcgccggcaacaac
tgggccaagggccactacaccgagggcgctgagctcatcgactccgtcctcgacgtcgtc
cgcaaggaggccgagaactgcgactgcctccagggtttccaggtctgccactcactgggc
ggaggcacgggctccggcatgggcaccctgctcatctccaagatcagggaggagttcccg
gaccggatgatgctgaccttctccgtcttcccgtcccccaaagtgtctgacacggtggtc
gagccctacaacgccacgctctcggtccaccagctcgtggagaacgccgacgagtgcatg
gtgctggacaacgaggcgctttacgacatctgcttccgcacactgaagctaaccactcct
agctttggtgatctgaaccacctgatcagtgccaccatgagtggtgtcacctgctgcctt
cgcttcccagggcagctgaactccgatctccgcaagcttgctgtcaacctgatccccttc
ccgcgcctgcacttcttcatggttggcttcgcgccactcacctcgcgtggctcccagcag
taccgctccctcaccgtccccgagctgacccaacagatgtgggactccaagaacatgatg
tgcgctgcggacccacgccacggccgctaccttactgcctccgccatgttccggggcaag
atgagcaccaaggaggtggacgagcagatgatcaatgtccagaataagagctcatcctac
ttcgtggaatggatccctaacaacgtcaagtcgagcgtgtgcgacatcgctccgcgtggc
ctctccatgtcctccacctttgttggcaactccacctcgatccaggagatgttccggcgg
gtgagcgagcagttcacggccatgttcaggaggaaggccttcttgcattggtacactggt
gagggcatggacgagatggagtttaccgaggcggagtgcaacatgaacgaccttgtctcc
gagtaccagcagtaccaggatgcgaccgccgacgaggaggctgattatgaggatgaggag
gctgcggctgcggcggagtga
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