Panicum virgatum (switchgrass): 120665538
Help
Entry
120665538 CDS
T07260
Name
(RefSeq) probable manganese-transporting ATPase PDR2
KO
K14950
manganese-transporting P-type ATPase [EC:7.2.2.-]
Organism
pvir
Panicum virgatum (switchgrass)
Brite
KEGG Orthology (KO) [BR:
pvir00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pvir02000
]
120665538
Transporters [BR:
pvir02000
]
Other transporters
Primary active transporters [TC:
3
]
120665538
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
E1-E2_ATPase
2TM_P5A-ATPase
Hydrolase
Cation_ATPase
Hydrolase_3
Sol_i_2
Motif
Other DBs
NCBI-GeneID:
120665538
NCBI-ProteinID:
XP_039801060
LinkDB
All DBs
Position
3N:28627843..28637776
Genome browser
AA seq
1171 aa
AA seq
DB search
MARFEVNGKSVQGVDLLRRRYWASRLDSWPFLALYALWLLLAVPALDFTDALIVLAALSA
AHILAFLFTAWSVDFRAFVGYSKVKDIHAANACKVTPAKFSGSKEIVPLHIRRNVASSSA
AGENEEIYFDFRKQRFIYSAEKDNFLKLRYPTKEPISNYAKGTGFGTEAKINTAVDKWGR
NIFEYPQPTFQKLMKEQIMEPFFVFQVFCVALWCLDEYWYYSLFTLFMLFLFESTMAKNR
LKTLTELRRVKVDNQIVLTYRCGKWVKIPGTELLPGDIVSIGRSTSGEDRSVPADMLLLA
GSAIVNEAILTGESTPQWKVSIAGRGPEEMLSIKRDKNHILFGGTKILQHTADKSVNLRA
PDGGCVAFVLRTGFETSQGKLMRTILFSTERVTANNKESGLFILFLLFFAIIASGYVLMK
GLEDPTRSRYKLLLSCSLIITSVIPPELPMELSIAVNTSLIALARRGIFCTEPFRIPFAG
KVDICCFDKTGTLTSDDMEFQGIVTLEDDDELISDANKLPLRTQEVLSSCHALVFVDNKL
VGDPLEKAAIKGIDWIYTSDEKAMSKKPGGQPVQIVHRFHFASHLKRMSVVVRIQEKFYA
FIKGAPETIQERLVDLPAAYVETYKKFTRQGSRVLALAYKLLPEMPVSEARSLERDQVES
DLTFSGFAVFNCPIRSDSGAVLQELGQSSHDLVMITGDQALTACHVASQVHISSKPVLIL
TRMKTGGFEWVSPDETDRAPYSAAEVAGLSESHDLCINGDCFEMLQSTEAVLQVIPYVKV
FARVAPEQKELVLTTFKSVGRVTLMCGDGTNDVGALKQAHVGIALLNAEPVQKADSKSKA
ENKSGKLKKQKPANEASSQVTPAANSSAKASSSRPLTAAERQREKLQKMLDEMNDESDGR
SAPIVKLGDASMASPFTAKHASVAPTLDIIRQGRSTLVTTLQMFKILGLNCLATAYVLSV
MYLDGVKLGDVQATISGVFTAAFFLFISHARPLQTLSAERPHPNIFCAYVLLSILGQFAM
HIFFLITAVNEASKHMPEECIEPDSDFHPNLVNTVSYMVNMMIQVATFAVNYMGHPFNQS
ISENKPFKYALYGAVAFFTVITSDMFRDLNDYMKLEPLPEGMRGKLMLWAMLMFCGCYGW
ERLLRWAFPGKMPSWEKRQKQAVANLEKKHD
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggttcgaggtgaacggcaagtcggtgcagggcgtggacctgctgcggcggcgg
tactgggcgtcgcgcctcgactcctggcccttcctcgcgctctatgcgctctggctgctg
ctcgccgtccctgcgctcgacttcactgacgcgcttatcgtcctcgcggcgctctccgct
gcccacatcctcgccttcctcttcaccgcctggtccgtcgacttccgggccttcgtcgga
tactccaaggtcaaggatatccatgcggctaatgcgtgcaaggtgactcccgcaaagttc
tctgggtccaaggagattgtgcccttgcacatacggagaaatgtggcctcgtcttcggct
gcaggagagaatgaggagatttactttgattttcggaagcagaggttcatctactcagcg
gagaaagataactttttaaaactccggtacccaacgaaggagccaatcagcaattatgcc
aagggtactggatttggaactgaggccaagattaacactgctgtggataaatggggtaga
aacatatttgagtatccgcagcccacatttcagaaattaatgaaggagcaaatcatggaa
ccattttttgttttccaggttttctgcgttgctctttggtgcctggacgagtattggtac
tacagtttgtttacgctcttcatgcttttcctgtttgagtctactatggcaaagaataga
ctgaagacattgactgagctaagacgtgtgaaagttgataatcagattgtgttgacctat
agatgtggaaaatgggttaaaatccctggaactgaactactacctggagatattgtgtca
ataggtcgctcaactagtggtgaagatagatctgtaccagcagatatgctattattagct
gggtctgcaatagtaaatgaagctattcttacaggagaatctactccacagtggaaggtt
tcaattgctggccgtggtcctgaggaaatgctatctataaagcgggataaaaaccatatc
ctatttggtggcactaagatattgcaacacactgcagataagtcggtaaatcttagagca
cctgatggtggttgtgtagcctttgtattgagaactggatttgagactagccaaggaaaa
ttgatgaggaccattttattttcaactgagagggttactgcaaacaacaaggaaagtggc
ttgtttatactctttttgctcttctttgccattatcgcgtctggttatgtgcttatgaag
ggactggaggacccgacaaggagcagatacaagcttttattgagttgttccttgattatt
acttctgtgataccccctgaactaccaatggagctctccatagcagtcaacacatcttta
attgcgttagctcggcgtggtattttctgcactgagccattcagaataccatttgctggg
aaggttgacatatgctgcttcgacaagacggggactctgacatcagatgatatggaattc
caaggtattgttactttggaagatgatgatgagctaatatctgatgcaaataagctgccc
ctccgaactcaagaagtgctttccagttgccatgcgttggtatttgtcgacaacaaactg
gttggtgatccccttgaaaaggctgctataaagggcatagactggatctacacatctgat
gagaaggccatgtctaaaaagcctggtggtcaacctgtacagattgtgcacaggttccat
tttgcttctcacttgaagagaatgtctgttgtcgtccgtattcaggagaaattttatgct
ttcattaagggtgcaccagagaccatccaagagagattagttgatttacctgctgcatat
gtggagacatacaagaaattcacgcggcagggttctcgggtcttggctcttgcatataaa
ttgcttcctgagatgcctgttagtgaagctagaagtctggaaagggatcaagtagagagc
gacctaacattttctggttttgcagtcttcaactgtcctataaggagtgactctggtgct
gtcttacaagaactaggacaatcttcccatgacttggtcatgattactggagaccaagcg
ttgactgcctgccatgttgctagccaagtacatatatcttccaaacctgttttaattttg
acacggatgaagactggtggttttgagtgggtttcgccagatgaaactgatagagctcct
tacagtgctgcggaggtcgcaggtttatcagaatcacatgacctttgtattaatggggac
tgctttgaaatgctacaaagtactgaggctgttctccaggttattccttatgtgaaggtt
tttgcacgtgttgctccagagcagaaagaacttgtactgactacattcaaaagtgttggg
agggtgacactgatgtgtggagatggaaccaatgatgttggtgcactgaagcaggcacat
gttggcatagctcttttgaatgctgaaccagttcagaaagccgactcaaaatccaaagct
gaaaataaatctgggaaattgaaaaaacagaagcctgctaatgaagcatcgtcacaagtg
actccagcagctaacagttctgctaaagcatcgagcagccgccccttgactgctgctgag
aggcagcgagaaaagctgcagaagatgttggacgaaatgaatgatgaaagtgatggtcgt
tcggcaccgattgtgaagcttggggatgcttctatggcctcaccattcacagcaaagcat
gcctccgttgcccccactcttgacatcatccgccaagggagaagcaccctagtcaccaca
cttcaaatgttcaagattcttggactcaactgccttgcaacagcatacgttctcagtgtc
atgtacctggatggtgtcaaactcggcgatgttcaggctacaatcagcggtgtcttcact
gcagccttcttcctcttcatctcccatgctcggccgctccaaacgctgtccgcagagcgg
cctcaccctaacatattctgtgcatatgttttgctctccattctcggtcagtttgccatg
cacatattcttcctaatcacagccgtcaatgaagcatccaagcatatgccagaggaatgc
attgaaccggactcagacttccatccgaaccttgtgaacacggtttcatatatggtgaac
atgatgatccaggtggcaacctttgctgtaaactacatgggccatccattcaaccagagc
atctccgagaacaagcccttcaagtatgctttgtacggagcagttgctttcttcacagtg
atcacttcggatatgttcagggatctgaatgactacatgaaactggaacccttgccagaa
ggaatgaggggcaaactgatgctttgggcaatgcttatgttctgtggatgctatgggtgg
gagcgccttctgcgatgggctttcccagggaagatgccgtcatgggagaagcgtcagaaa
caggcagttgcaaacctggagaaaaagcacgactag
DBGET
integrated database retrieval system
