Panicum virgatum (switchgrass): 120665619
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Entry
120665619 CDS
T07260
Name
(RefSeq) probable transmembrane GTPase FZO-like, chloroplastic isoform X1
Organism
pvir
Panicum virgatum (switchgrass)
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Gene cluster
GFIT
Motif
Pfam:
Dynamin_N
MMR_HSR1
GTP_EFTU
TMP-TENI
RsgA_GTPase
PduV-EutP
Septin
ABC_tran
SpoIVA_ATPase
AIG1
PA
AAA_15
Motif
Other DBs
NCBI-GeneID:
120665619
NCBI-ProteinID:
XP_039801156
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Position
3N:complement(30006881..30017755)
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AA seq
841 aa
AA seq
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MSAASTAARLLLPRPAAPFHSLLPSRRRAVRASAVAAGGGGGGGISGGSGGGAGGAKEPP
RTLFPGGFKRPEIQVPALVLRVGTEEALQSGDEVAAAVARGVGIVVLEAGEEGGGRAYEA
AVALRAAVGDRAYLLVAERVDVASAVGASGVVLADDGIPAIVARSMMMKSNADSIYLPIV
ARTINSANSAISASSSEGADFLIVNTGSEDFADVMNGGVGQQVKIPIFFMLNVHSGSTYS
DITSRLIRSGVSGVVTSLAGIQHLTDDLIERDFSKVDAIEEVPQASNSSASTLENAINAT
VLTREKTKVAGFTELDEKVVQLIEREKPILSEAVAVIRKAAPMMEEVDLLVDAASRLSEP
FLLVIVGEFNSGKSTFINALLGRQYLQEGVVPTTNEIMLLSYSEIDSESFERCERHPDGQ
FMCYLSVPILKEMNLVDTPGTNVILQRQQRLTEEYVPRADLILFVLSSDRPLTESEVGFL
QYIQQWKKKVVFVLNKLDLFRNNNELEEATAFVKENAKKLLNTEDVTLFPVSSRFALEAK
LSYSKNSGGKHLMEAMLSDPIWRSSKFCELEDYLLSFLDSSTENGKERVRLKLETPIGIA
DRLLISCQRLVKLEYEKAVDDLTSIKDLVSGANNYAAKLEADSNSWQKQISSLIERAKGR
AVTLMESILQLSNIDLIFTYTVKGKTGSSPRATSFVQNDIITPAFDDAVAFGTFGGLGVA
GLSASLLTSVLSTTLEDLLALALCSAGGFFVLSSFPGRRKQAIEKVNKAADELSRKVDEA
IQKDISQSANNLVRFVEVISKPYQEACQQRVDWLRGVQGELSSVERELQTLKVEIQNLHG
S
NT seq
2526 nt
NT seq
+upstream
nt +downstream
nt
atgtccgccgcttccaccgccgcccgcctcctcctcccgcgcccggccgcccccttccac
tccctcctcccctcccgccgccgcgcggtccgcgccagcgccgtcgccgctggaggcggc
ggcggaggaggcatctccggcggcagtggcgggggcgcgggcggcgcgaaggagccgccg
cggacgctgttccccggcggcttcaagcggccggagatccaggtgcccgcgctcgtcctc
cgcgtcggcaccgaggaggcgctgcagtccggggatgaggtggctgccgccgtggcccgg
ggcgtggggatcgtcgtgctcgaggccggggaggagggcggcgggcgcgcgtacgaggcc
gcggtcgcgctcagggccgcggtcggggaccgcgcgtacctgctggtcgcggagcgcgtc
gacgtcgcctccgcggtcggggcgagcggcgtcgtgctcgcggacgacggtattcctgct
attgttgcaaggagtatgatgatgaaatcaaatgctgactccatatatctccctatcgtt
gctagaacaataaactcagcaaactctgcaataagcgcttcaagttctgaaggggctgat
tttctgattgtaaatactggcagtgaagattttgctgatgttatgaatggtggtgttggt
caacaggtgaagattccgattttcttcatgttaaatgtgcacagtggatcaacttattct
gacatcacgtccaggttgatccgatctggtgtatctggagttgttacatccttggctggt
attcaacacctcactgatgatcttatagaaagggatttctcaaaagtggatgccattgag
gaagtcccacaagccagtaactcttctgctagcacattggaaaatgcaattaatgcaaca
gtcctaactcgtgagaaaaccaaagttgctggatttacagaactggatgaaaaagtggtg
cagttgatagagagggaaaagcctattctaagcgaagctgttgctgttatccgcaaggca
gcaccaatgatggaagaagttgaccttctagttgatgctgcttctcgcctgagtgagcca
tttttgttggttattgtgggtgaatttaactcaggaaaatctacttttataaatgctcta
cttggaaggcagtatcttcaggaaggagttgtacctacgacaaatgaaatcatgctacta
tcatattctgagattgattctgaaagctttgaaagatgtgaaaggcacccagatggtcaa
ttcatgtgctatttgtctgttcctattttaaaggaaatgaatctagtcgatactcctggg
accaatgttattcttcagaggcaacaacgacttactgaagaatatgtgccgcgagctgat
ttaatactatttgtactatcttcagatagaccattaactgaaagtgaggttggatttctt
cagtatattcagcagtggaaaaagaaagttgtatttgttctaaacaaattggacctcttt
cggaacaacaatgagcttgaagaagctactgcatttgtcaaggaaaatgcgaagaaattg
cttaacacagaggatgtaacactgttccctgtatcttcacgcttcgctctggaagccaag
ctttcatattccaaaaacagtggtggaaaacatttgatggaagctatgcttagtgatcct
atatggagaagcagcaagttctgtgaacttgaggattacttactgagcttcttagatagt
tcaacagaaaatggaaaggaaagggtccggttgaaacttgaaacaccaataggcattgct
gatcgtttgctaatatcatgtcaaagacttgtgaaactagaatatgaaaaagctgttgat
gatttaacatccataaaggatctagtttctggtgcaaataattatgctgctaagcttgag
gctgatagcaattcttggcagaagcagatttcatctcttattgagagagcaaaaggtcga
gcagtaacactcatggaatctatccttcagttgtcaaacattgaccttatttttacgtac
acggttaaaggaaaaacaggcagttcccccagagccacatcatttgttcagaatgatatt
ataactccagcatttgatgatgccgtggcttttggaacatttggaggcctaggcgttgct
ggattgtcagcttctcttttgacatctgttttgtcaacaacgcttgaagatctccttgct
cttgcactttgctcagctggcggattttttgttttatcaagtttccctggtcgacggaag
caggcaatagaaaaggttaacaaggctgccgatgaactgtctcggaaagttgatgaagct
atccaaaaggatatctcacagagtgctaataacctagtccgctttgttgaggttatcagc
aaaccgtaccaggaagcatgtcagcaaagagtagattggttgcggggcgttcagggtgaa
ttgtcatctgttgagcgtgagctccaaactttgaaagttgaaatccaaaatcttcatgga
tcatga
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